Silac proteomics

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Proteomics (2290)
Unknown (419)
Other (20)
Genomics (19)
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Organisms

Allexis (1949)
Arabidopsis thaliana (1949)
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Entamoeba histolytica HM-1:IMSS-A (1949)
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cellular organisms (1)

Organisms

Homo sapiens (10)
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Repository

pride (1949)
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Tissue

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Disease

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Technology Type

Mass Spectrometry (1949)
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SWATH MS (26)
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All-ion fragmentation (8)
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HDMSE (3)
MSE (2)
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Instrument Platform

Q Exactive (75)
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UNIPROT ID/AC

1433B_HUMAN (4)
1433E_HUMAN (4)
1433F_HUMAN (4)
1433G_HUMAN (4)
1433S_HUMAN (4)
1433T_HUMAN (4)
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9606.ENSP00000291295 (4)
9606.ENSP00000322421 (4)
9606.ENSP00000325681 (4)
9606.ENSP00000330842 (4)
9606.ENSP00000331127 (4)
9606.ENSP00000348054 (4)
9606.ENSP00000349467 (4)

ENSEMBL ID

ENSG00000170477 (26)
ENSG00000147251 (13)
ENSG00000247315 (13)
ENSMUSG00000027651 (12)
ENSMUSP00000141097 (11)
ENSMUSG00000021039 (10)
ENSMUSG00000090272 (7)
ENSMUSP00000106991 (7)
ENSMUSP00000111587 (6)
ENSMUSG00000098557 (5)
ENSMUSP00000141542 (2)
ENSG00000176092 (1)
ENSMUSG00000096833 (1)

First Public Date

2024 (4)
2023 (4)
2021 (2)
2020 (2)
2026 (1)
2017 (1)
2013 (1)
2012 (1)

Modification

4x(15)N labeled L-arginine (83)
2x(15)N labeled L-lysine (81)
N6 (15)
4 (14)
15.994915 (8)
N6-dimethyl-L-lysine (8)
6.020129 (7)
-17.026549 (6)
42.010565 (6)
57.021464 (6)
4-tetrahydrothiazine-3-carboxylic acid (4)
0.984016 (3)
10.008269 (3)
45.029395 (3)
79.966331 (2)
+3amu) (1)
-18.010565 (1)
125.047678 (1)
31.989829 (1)
37.006603 (1)
56.026215 (1)
59.036279 (1)
7.017164 (1)
71.037114 (1)
73.016378 (1)
75.998286 (1)
8.014199 (1)
89.011293 (1)
Not available (1)

Study type

RNA-seq of coding RNA (3)
Proteomic profiling by mass spectrometer (1)
Transcription profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2015 (51)
2016 (43)
2017 (41)
2014 (34)
2019 (30)
2018 (29)
2013 (29)
2021 (24)
2023 (21)
2020 (21)
2010 (19)
2011 (16)
2012 (14)
2009 (14)
2022 (12)
2024 (10)
2025 (8)
2008 (5)
2006 (2)
2026 (1)

Lab affiliation

Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (24)
Cellzome (19)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany (16)
Institute of Molecular Biology (IMB), Mainz, Germany (11)
CRUK Beatson Institute (10)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (9)
Cornell University (9)
Cancer Science Institute of Singapore (CSI), National University of Singapore (NUS) (8)
European Institute of Oncology (8)
UMR 7367 CNRS-UL IMoPA Biopôle de l'Université de Lorraine Campus Brabois-Santé 9 avenue de la forêt de Haye 54505 Vandoeuvre-les-Nancy FRANCE (8)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (7)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg im Breisgau, Germany (7)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (7)
David H. Koch Institute for Integrative Cancer Research Howard Hughes Medical Institute Massachusetts Institute of Technology Cambridge, MA 02139, USA (6)
Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (6)
Department of Cell and Molecular Biology, College of Medicine, Chang Gung University, Taoyuan, Taiwan (6)
MDC (6)
Proteomics (6)
University of Edinburgh (6)
Department of Biochemistry, Purdue University (5)
Diabetes and Circadian Rhythms Department, Nestlé Institute of Health Sciences, CH-1015 Lausanne, Switzerland (5)
European Institute of Oncology, Milan, Italy (5)
Head of the Curie Institute Mass Spectrometry Platform (5)
IGMM, CNRS, Univ Montpellier, Montpellier, France (5)
IGMM, CNRS, Université de Montpellier, Montpellier, France (5)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany Frankfurt Cancer Institute, Frankfurt am Main, Germany Cardio-Pulmonary Institute, Frankfurt am Main, Germany (5)
Biochemistry (4)
Cancer Biology Department, Fox Chase Cancer Center, Philadelphia, PA, USA (4)
Chair of Molecular Biology Institute of Cellular and Molecular Biology Estonia (4)
European Institute of Oncology, Milan (4)

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Quantification of mitochondrial translation by pulse SILAC

We developed a simple method that combined biochemical mitochondria isolation and pulse SILAC approach to monitor the mitochondrial translation. Our approach allows us to quantify 12 out of the 13 mitochondrial translation products, the highest coverage among analogous methods reported, and provide ...

ORGANISM(S): Homo Sapiens (human)

2022-12-28 | PXD022476 | JPOST Repository

SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers.

Not available

S-EPMC3861710 | biostudies-literature

Effective correction of experimental errors in quantitative proteomics using stable isotope labeling by amino acids in cell culture (SILAC).

Not available

S-EPMC3394155 | biostudies-literature

Identification of disease specific pathways using in vivo SILAC proteomics in dystrophin deficient mdx mouse.

Not available

S-EPMC3650321 | biostudies-literature

Proteomics of microparticles with SILAC Quantification (PROMIS-Quan): a novel proteomic method for plasma biomarker quantification.

Not available

S-EPMC4390257 | biostudies-literature

SILAC-based quantitative proteomics using mass spectrometry quantifies endoplasmic reticulum stress in whole HeLa cells.

Not available

S-EPMC6899043 | biostudies-literature

Screening differentially expressed proteins from co-cultured hematopoietic cells and bone marrow-derived stromal cells by quantitative proteomics (SILAC) method.

Not available

S-EPMC6637644 | biostudies-literature

Quantitative analysis of SILAC data sets using spectral counting.

Not available

S-EPMC4326228 | biostudies-literature

SysQuan: Repurposing SILAC Mice for the Cost-Effective Absolute Quantitation of the Human Proteome.

Not available

S-EPMC12143667 | biostudies-literature

EV71 proteomics - Analysis of EV71 infection progression using triple-SILAC-based proteomics approach

Enterovirus 71 (EV71), a member of Picornaviridae, causes severe neurological and systemic illness in children. To better understand the virus-host cell interactions, we performed a triple-SILAC-based quantitative proteomics study monitoring host cell proteome changes after EV71 infection. Based on ...

ORGANISM(S): Homo sapiens (Human)

2015-08-31 | PXD002483 | Pride

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2763 Results

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