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ProteomicsThe structure of human thyroglobulin
Thyroglobulin protein is the precursor of thyroid hormones, which are essential for growth, development and control of metabolism in vertebrates. Hormone synthesis from thyroglobulin (TG) occurs in the thyroid gland via the iodination and subsequent coupling of pairs of tyrosine amino acids, whose p...
ORGANISM(S): Homo sapiens (Human) 
2020-02-06 | PXD014821 | Pride
Thyroxine  t3  t4  thyroid hormone  tyrosine iodination  cryo-em 
ProteomicsLaboratory evolution of Escherichia coli enables life based on fluorinated amino acids
Organofluorine compounds are toxic to various living beings in different habitats. This usher the development of strategies based on the metabolic capacity of various fast-growing microbial strains to evolve an effective adaptation strategy for efficient environmental cleaning. We tackle this proble...
ORGANISM(S): Escherichia coli 
2020-11-24 | PXD011771 | Pride
E coli Fluorine Silac Noncanonical Evolution Multi-omics 
UnknownuPA-PAI-1 heteromerization promotes breast cancer progression by attracting tumorigenic neutrophils.
Not available
S-EPMC8185543 | biostudies-literature
ProteomicsCross-platform Clinical Proteomics using the Charite Open Standard for Plasma Proteomics (OSPP)
The role of plasma and serum proteomics in characterizing human disease, identifying biomarkers, and advancing diagnostic technologies is rapidly increasing. However, there is an ongoing need to improve proteomic workflows in terms of accuracy, reproducibility, platform transferability, and cost-eff...
ORGANISM(S): Homo sapiens (Human) 
2025-12-29 | PXD070765 | Pride
Lc-ms Dia Biomarker panel Mrm-hr Precision medicine Internal standard 
ProteomicsReliable identification of protein-protein interactions by crosslinking mass spectrometry_CLMS_sSDA_datasets
Crosslink mass spectrometry datasets on sulfo-SDA-crosslinked affinity-purified RNA polymerase binders from SPA-pulldowns in E. coli K12, on rpoB-SPA / nusG-SPA / yacL-SPA. Cleared E. coli lysate was added to anti-FLAG M2 beads to isolate binders to rpoB (RNA polymerase), nusG or yacL (RNA polymer...
ORGANISM(S): Escherichia Coli 
2021-04-14 | PXD024148 | JPOST Repository
ProteomicsReliable identification of protein-protein interactions by crosslinking mass spectrometry_AP-MS
Quantitative proteomics dataset on soluble, affinity-enriched proteins from SPA-pulldowns in E. coli K12, on rpoB-SPA / nusG-SPA / yacL-SPA. This data was used to identify proteins for enrichment analysis and subsequent crosslinking mass spectrometry search (DB creation). Cleared E. coli lysate was ...
ORGANISM(S): Escherichia Coli 
2021-04-14 | PXD024146 | JPOST Repository
ProteomicsReliable identification of protein-protein interactions by crosslinking mass spectrometry_CLMS_BS3&DSSO_datasets
Crosslink mass spectrometry dataset on soluble, SEC-fractionated high-molecular weight proteome of E. coli, crosslinked with BS3 or DSSO. This data was used to identify protein-protein interactions and to obtain information on protein (complex) topologies. In the end, the data was used for finding ...
ORGANISM(S): Escherichia Coli 
2021-04-14 | PXD019120 | JPOST Repository
ProteomicsReliable identification of protein-protein interactions by crosslinking mass spectrometry_Protein coelution
Quantitative proteomics dataset on soluble, SEC-fractionated high-molecular weight proteome of E. coli for protein coelution analysis. This data was used to identify proteins for a subsequent crosslinking mass spectrometry search (DB creation) and to correlate protein elution behaviour to validate/...
ORGANISM(S): Escherichia Coli 
2021-04-14 | PXD019004 | JPOST Repository
ProteomicsLeveraging Parameter Dependencies in High-Field Asymmetric Waveform Ion-Mobility Spectrometry and Size-exclusion Chromatography for Proteome-wide Crosslinking Mass Spectrometry_protein ID dataset
Ion mobility spectrometry shows great promise to tackle analytically challenging research questions by adding another separation dimension to liquid chromatography-mass spectrometry. The understanding of how analyte properties influence ion mobility has increased through recent studies but no clear ...
ORGANISM(S): Homo Sapiens (human) 
2022-12-16 | PXD022341 | JPOST Repository
ProteomicsLeveraging Parameter Dependencies in High-Field Asymmetric Waveform Ion-Mobility Spectrometry and Size-exclusion Chromatography for Proteome-wide Crosslinking Mass Spectrometry_CLMS dataset
Ion mobility spectrometry shows great promise to tackle analytically challenging research questions by adding another separation dimension to liquid chromatography-mass spectrometry. The understanding of how analyte properties influence ion mobility has increased through recent studies but no clear ...
ORGANISM(S): Homo Sapiens (human) Cellular Organisms 
2022-12-16 | PXD022360 | JPOST Repository
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