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TranscriptomicsElectron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil contaminated aquifer by Pyro-SIP
Bioavailability of electron acceptors is probably the most limiting factor in the restoration of anoxic, contaminated environments. The oxidation of contaminants such as aromatic hydrocarbons, particularly in aquifers, often depends on the reduction of ferric iron or sulphate. We have previously det...
ORGANISM(S): unidentified 
2011-03-18 | E-GEOD-25449 | biostudies-arrayexpress
ProteomicsCacyBP/SIP - RPL6 interaction: potential influence on ribosome function
Previously, we have shown that CacyBP/SIP interacts with NPM1, a protein involved in ribosome biogenesis. In this work, examined the potential impact of CacyBP/SIP on ribosome biogenesis and/or function. At first, we searched for ribosomal proteins (RPs) that might interact with CacyBP/SIP. Using ma...
ORGANISM(S): Mus musculus (Mouse) 
2025-07-28 | PXD064560 | Pride
Mass spectrometry Ip Cacybp/sip  rps 
TranscriptomicsRNA-seq on SIP+-treated mating type minus cultures of Seminavis robusta
In order to obtain a global view on the transcriptional changes induced by the sex-inducing pheromone released by Seminavis robusta mating type plus cells (SIP+), an RNA-seq experiment was conducted. Therefore, purified SIP+ from RP-UPLC/MS was added to MT- cultures, 15 min before light onset after ...
ORGANISM(S): Seminavis robusta 
2016-03-22 | E-MTAB-4056 | biostudies-arrayexpress
GenomicsSedimenticola thiotaurini strain:SIP-G1
Sedimenticola sp. SIP-G1 genome sequencing and assembly
PRJNA282984 | ENA
Genomicssip soil bacteria
sip soil bacteria Metagenome
PRJNA1510847 | ENA
GenomicsCombined assembly of SIP fractions from 6 SIP parent projects
Combined assembly of SIP fractions from 6 SIP parent projects Other
PRJNA1120183 | ENA
GenomicsPhage Sip
Phage Sip. Isolated from River Wear, Durham, UK
PRJEB44564 | ENA
TranscriptomicsBowel miRNA expression profiles of infants with gastrointestinal conditions
We have employed miRNA microarray expression profiling to identify miRNA differentially expressed in neonatal bowel tissues with different gastrointestinal conditions. Bowel tissues were collected from infants who underwent surgery treatment for necrotizing enterocolitis (NEC), spontaneous intestina...
ORGANISM(S): Homo sapiens 
2015-08-24 | E-GEOD-68054 | biostudies-arrayexpress
ProteomicsProteomic SIP of the soil communities
characterization of soil communities amended with 13C-methanol using proteomic SIP
ORGANISM(S): uncultured soil bacterium S0137 
2018-11-21 | PXD011739 | Pride
Proteomic sip Soil 
TranscriptomicsBowel expression profiles of infants with gastrointestinal conditions
We have employed whole genome microarray expression profiling to identify genes differentially expressed in neonatal bowel tissues of different gastrointestinal conditions. Bowel tissues were collected from infants who underwent surgery treatment for necrotising enterocolitis (NEC) and spontaneous i...
ORGANISM(S): Homo sapiens 
2014-01-21 | E-GEOD-46619 | biostudies-arrayexpress
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