Smith Sophia S - OmicsDI

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Unknown (60)
Genomics (3)
Metabolomics (2)
Transcriptomics (1)
Proteomics (1)

Organisms

Homo sapiens (4)
Lysiphlebus fabarum (1)

Repository

EGA (3)
MetaboLights (2)
biostudies-arrayexpress (1)
pride (1)

Tissue

Venom (1)

Technology Type

Mass spectrometry (2)
Affymetrix 6.0 (1)
Gel-based experiment (1)
Mass Spectrometry (1)

Instrument Platform

Flow injection analysis MS - negative (1)
Flow injection analysis MS - positive (1)
Liquid Chromatography MS - alternating (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2012 (1)
2025 (1)
2022 (1)
2020 (1)

CHEBI ID

CHEBI:10048 (1)
CHEBI:10049 (1)
CHEBI:103211 (1)
CHEBI:104012 (1)
CHEBI:104121 (1)
CHEBI:104362 (1)
CHEBI:11060 (1)
CHEBI:111006 (1)
CHEBI:1157 (1)
CHEBI:12936 (1)
CHEBI:12962 (1)
CHEBI:13389 (1)
CHEBI:1372 (1)
CHEBI:137325 (1)
CHEBI:138794 (1)
CHEBI:139108 (1)
CHEBI:1427 (1)
CHEBI:143010 (1)
CHEBI:145242 (1)
CHEBI:145846 (1)
CHEBI:1467 (1)
CHEBI:15344 (1)
CHEBI:15345 (1)
CHEBI:15346 (1)
CHEBI:15351 (1)
CHEBI:15354 (1)
CHEBI:15366 (1)
CHEBI:15412 (1)
CHEBI:15428 (1)
CHEBI:15430 (1)

Metabolite Name

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran (1)
(R)-2,3-Dihydroxy-3-methylbutanoate (1)
(R)-2,3-Dihydroxy-3-methylpentanoate (1)
(R)-Glycerate (1)
(R)-Pantoate (1)
(R)-Pantothenate (1)
(S)-2-Aceto-2-hydroxybutanoate (1)
(S)-3-Hydroxydodecanoyl-CoA (1)
(S)-3-Hydroxyhexanoyl-CoA (1)
(S)-3-Hydroxyoctanoyl-CoA (1)
(S)-3-Methyl-2-oxopentanoate (1)
1,2-Diacyl-sn-glycerol (dihexadecanoyl, n-C16:0) (1)
1-Aminopropan-2-ol (1)
1-Pyrroline-5-carboxylate (1)
1-deoxy-D-xylulose (1)
1-deoxy-D-xylulose 5-phosphate (1)
1-dodecanoyl-sn-glycerol 3-phosphate (1)
1-octadecanoyl-sn-glycerol 3-phosphate (1)
10-Formyltetrahydrofolate (1)
2,3,4,5-Tetrahydrodipicolinate (1)
2,3-Dihydrodipicolinate (1)
2,3-dihydroxycinnamic acid (1)
2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine (1)
2-C-methyl-D-erythritol 4-phosphate (1)
2-Dehydropantoate (1)
2-Deoxy-D-ribose 1-phosphate (1)
2-Deoxy-D-ribose 5-phosphate (1)
2-Hydroxy-3-oxopropanoate (1)
2-Isopropylmaleate (1)
2-Methylcitrate (1)

Study type

Transcription profiling by array (1)

Release Date

2015 (9)
2018 (6)
2023 (5)
2022 (5)
2016 (5)
2024 (4)
2021 (4)
2012 (3)
2025 (3)
2020 (3)
2019 (2)
2017 (2)
2013 (2)
2010 (2)
2026 (1)
2014 (1)
2011 (1)
2009 (1)
2008 (1)
2007 (1)

Lab affiliation

INRA , CNRS , Université de Nice, Sophia Antipolis, France (1)

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Horizontal Transfer of Bacteriocin Biosynthesis Genes Requires Metabolic Adaptation To Improve Compound Production and Cellular Fitness

Biosynthetic gene clusters (BGCs) encoding the production of bacteriocins are widespread among bacterial isolates and are important genetic determinants of competitive fitness within a given habitat. Staphylococci produce a tremendous diversity of compounds, and the corresponding BGCs are frequen...

2022-11-09 | MTBLS5196 | MetaboLights

5,10‐methenyltetrahydrofolate synthetase deficiency: An extreme rare defect of folate metabolism in two Dutch siblings

Not available

S-EPMC10910211 | biostudies-literature

Lysiphlebus fabarum (Hymenoptera: Braconidae: Aphidiinae) venom proteomic analysis

Venom injected at oviposition is crucial for successful reproduction in most parasitoid wasp species (Moreau & Asgari 2015; Poirié et al. 2014). The venom of the pea aphid parasitoid Aphidius ervi was analyzed previously using a combined transcriptomic and proteomic approach (Colinet et al. 2014) an...

ORGANISM(S): Lysiphlebus fabarum

2020-04-24 | PXD015758 | Pride