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ProteomicsPeptide standard acquired with the dual-gated SLIM-Orbitrap
Raw data collected on the dual-gated SLIM-Orbitrap. The sample contained a mixture of standard peptides at 1 uM equimolar concentration in 60:40 water:acetonitrile with 1% acetic acid (v/v). The peptides were kemptide, angiotensin I, bradykinin, neurotensin, angiotensin II, renin substrate tetradeca...
ORGANISM(S): Peptide Standards 
2023-08-23 | MSV000092738 | MassIVE
TranscriptomicsAcute effects on the human peripheral blood transcriptome of decompression sickness secondary to scuba diving
Decompression sickness (DCS) is a potentially fatal condition usually observed after scuba diving. It involves bubble formation in blood and tissues from dissolved inert gas (usually nitrogen or helium), secondary to decreases in ambient pressure (decompression).To the best of our knowledge, no stud...
ORGANISM(S): Homo sapiens 
2021-05-23 | E-MTAB-10388 | biostudies-arrayexpress
TranscriptomicsThe role of qseE, qseF and qseG in the regulation of EHEC virulence
Escherichia coli 8624 and the isogenic mutants in qseE, qseF and qseG are compared to determine the role that each of the genes play in regulation of the transcriptome. These results are verified by qRT-PCR and reveal the important role of this three-component signaling system. Escherichia coli 862...
ORGANISM(S): Escherichia coli 
2010-04-05 | E-GEOD-12831 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis reveals differential splicing events in IPF lung tissue
Objectives: Idiopathic pulmonary fibrosis (IPF) is a complex disease in which a multitude of proteins and networks are disrupted. Interrogation of genome-wide transcription through RNA sequencing (RNA-Seq) enables the determination of genes whose differential expression is most significant in IPF, a...
ORGANISM(S): Homo sapiens 
2014-03-27 | E-GEOD-52463 | biostudies-arrayexpress
ProteomicsDifferential Proteomic Analysis of Bordetella pertussis OMV
Differential proteomic analysis of outer membrane vesicles from Bordetella pertussis (two strains: Bvg+ and Bvg-)
ORGANISM(S): Bordetella Pertussis (ncbitaxon:520) 
2017-11-09 | MSV000081702 | MassIVE
GenomicsEpigenetic regulation of cell type-specific expression patterns in the human mammary epithelium [ChIP-Seq]
Here we describe the application of high-throughput sequencing technology for profiling histone and DNA methylation, and gene expression patterns of normal human mammary progenitor-enriched and luminal lineage-committed cells. We observed significant differences in histone H3 lysine 27 tri-methylati...
ORGANISM(S): Homo sapiens 
2011-03-01 | E-GEOD-26137 | biostudies-arrayexpress
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