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ProteomicsIdentification of differentially expressed proteins in SNF2L-deficient MDA-MB-231 cells using mass spectrometry.
To identify SNF2L target proteins involved in GSH homeostasis in cancer cells, we conducted a quantitative proteomic screening of SNF2L-KO and parental MDA-MB-231 cells.
ORGANISM(S): Homo sapiens (Human) 
2024-11-12 | PXD052912 | Pride
Snf2l-ko Ms Mda-mb-231 cell 
TranscriptomicsExpression data from Hap1 parental control and Baz2B-KO cell lines
Baz2B protein was shown to form a chromatin remodelig complex mit Snf2H or Snf2L catalytic subunits. It is known that chromatin remodeling proteins regulate diffferent DNA-templated processes, therefore we wanted to know whether Baz2B plays a role in transcription regulation. We used microarrays to ...
ORGANISM(S): Homo sapiens 
2023-11-27 | GSE218705 | GEO
Genomics
Genome-wide SNF2L, NRF2 and RNA POL II binding sites in MDA-MB-231 cells.
PRJNA1119646 | ENA
GenomicsExpression data from Hap1 parental control and Baz2B-KO cell lines
Expression data from Hap1 parental control and Baz2B-KO cell lines
PRJNA905093 | ENA
TranscriptomicsPfSnf2L - an epigenetic regulator of just-in-time expression and gametocyte formation [RNA-seq]
The complex life cycle of the malaria parasite Plasmodium falciparum (Pf) and the accompanying transcriptional variation is only explained in part by stage-specific transcription factors like the ApiAP2 family, as these factors are strongly under-represented in Pf. Global and local changes in chroma...
ORGANISM(S): Plasmodium falciparum 
2024-10-17 | GSE228948 | GEO
GenomicsPfSnf2L - an epigenetic regulator of just-in-time expression and gametocyte formation [MNase-Seq]
The complex life cycle of the malaria parasite Plasmodium falciparum (Pf) and the accompanying transcriptional variation is only explained in part by stage-specific transcription factors like the ApiAP2 family, as these factors are strongly under-represented in Pf. Global and local changes in chroma...
ORGANISM(S): Plasmodium falciparum 
2024-10-17 | GSE228947 | GEO
TranscriptomicsIntegration of Hi-C and ChIP-seq data reveals distinct types of chromatin hubs
We have analyzed publicly available K562 Hi-C data, which enables genome-wide unbiased capturing of chromatin interactions, using a Mixture Poisson Regression Model to define a highly specific set of interacting genomic regions. We integrated multiple ENCODE Consortium resources with the Hi-C data, ...
ORGANISM(S): Homo sapiens 
2012-06-30 | E-GEOD-32213 | biostudies-arrayexpress
GenomicsPfSnf2L - an epigenetic regulator of just-in-time expression and gametocyte formation [MNase-Seq]
PfSnf2L - an epigenetic regulator of just-in-time expression and gametocyte formation [MNase-Seq]
PRJNA952234 | ENA
GenomicsPfSnf2L - an epigenetic regulator of just-in-time expression and gametocyte formation [RNA-seq]
PfSnf2L - an epigenetic regulator of just-in-time expression and gametocyte formation [RNA-seq]
PRJNA952236 | ENA
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