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TranscriptomicsTranscription profiling of Streptococcus pneumoniae after incubation with host respiratory tract epithelial cells
In order to study pneumococcal gene expression changes after incubation with host epithelial cells, logarithmic-phase grown S. pneumoniae strains (82 and R6) were incubated with host epithelial cells (A549 and ETEC) in T75 cell culture flasks at an MOI range of 10:1 ~ 50:1. After incubation for 1 h ...
ORGANISM(S): Streptococcus pneumoniae 
2008-05-07 | E-TABM-187 | biostudies-arrayexpress
ProteomicsProteome of Chinese Breast Cancers (FUSCC-Shao Lab)
Raw data of TMT-labeled proteome of Chinese breast cancers. Uploaded by Zhi-Ming Shao Lab, Fudan University Shanghai Cancer Center (FUSCC)
ORGANISM(S): Homo Sapiens 
PXD042886 |
TranscriptomicsTranscription profiling of S. pneumonia early response to to THP-1 human macrophages
Transcriptional responses of an unencapsulated Streptococcus pneumoniae strain derived from TIGR4 to human macrophages THP-1 were investigated at the early stages of interactions (0.5 h, 1 h and 3h).
ORGANISM(S): Streptococcus pneumoniae 
2008-10-21 | E-FPMI-16 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Streptococcus pneumoniae TCS08 mutant (disrupted in rr08) compared to the parent wild type strain TIGR4
Transcriptional changes of an TCS08 mutant (disrupted in rr08) compared to the parent wild-type strain TIGR4 when both strains were cultured to early logarithmic growth phase in THY broth.
ORGANISM(S): Streptococcus pneumoniae 
2008-12-20 | E-FPMI-17 | biostudies-arrayexpress
UnknownEpitranscriptomic regulation of cortical neurogenesis via Mettl8-dependent mitochondrial tRNA m3C modification.
Not available
S-EPMC10031801 | biostudies-literature
TranscriptomicsGene expression after focal demyelination of the corpus callosum
To determine expression profiles of cytokines and growth factor profiles in the subventricular zone (SVZ) after demyelination we performed gene array analysis. In SVZ after 4 days post lesin (dpl) LPC-injected tissue, demonstrated regulation of BMP pathway elements, including increased chordin, nogg...
ORGANISM(S): Mus musculus 
2010-04-13 | E-GEOD-21310 | biostudies-arrayexpress
TranscriptomicsDegradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L. ssp. indica)
MicroRNAs (miRNAs) and small interfering RNAs (siRNAs) regulate gene expression in eukaryotes. Plant miRNAs modulate their targets mainly via messenger RNA (mRNA) cleavage. Small RNA targets have been extensively investigated in Arabidopsis using computational prediction, experimental validation, an...
ORGANISM(S): Oryza sativa Indica Group 
2010-01-01 | E-GEOD-19050 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA-seq with Waterfall Reveals Molecular Cascades underlying Adult Hippocampal Neurogenesis
Somatic stem cells contribute to tissue ontogenesis, homeostasis, and regeneration through sequential processes. Systematic molecular analysis of stem cell behavior is challenging because classic approaches cannot resolve cellular heterogeneity or capture developmental dynamics. Here we provide a co...
ORGANISM(S): Mus musculus 
2015-08-30 | E-GEOD-71485 | biostudies-arrayexpress
ProteomicsThe interacting protein peptide sequences of stathmin
The peptide sequences identified by mass spectrometry in the proteins immunoprecipitated from stathmin-GFP expressed HEK293T lysates with the GFP-beads.
ORGANISM(S): Homo sapiens (Human) 
2021-09-10 | PXD023906 | Pride
Human Cell Lc-ms/ms 
UnknownFMRP Modulates Neural Differentiation through m6A-Dependent mRNA Nuclear Export.
Not available
S-EPMC6687293 | biostudies-literature
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