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MetabolomicsIntegrated transcriptomic and metabolic profiling reveals the molecular mechanism of improved nitrogen metabolism in walnut (Juglans regia L.) roots mediated by soybean intercropping

The practice of intercropping young walnut orchards with soybeans has emerged as a promising approach within the framework of sustainable agricultural management. However, the precise impacts of soybean intercropping on nitrogen metabolism in walnut roots remain insufficiently elucidated. This st...

2026-01-19 | MTBLS13719 | MetaboLights
MetabolomicsWild soybean rhizosphere microbiomes buffer continuous cropping obstacles in cultivated soybean via functional cross-kingdom synthetic communities

A cross-kingdom synthetic community (SSC) derived from wild soybean rhizosphere soil was constructed and inoculated onto cultivated soybeans suffering from continuous cropping obstacles. Root exudates from cultivated soybeans were collected before and after inoculation with the SSC via a hydropon...

2026-03-14 | MTBLS13803 | MetaboLights
MetabolomicsMulti-omics profiling identifies MAPK signaling suppression associated with tetracycline-induced root toxicity in soybean
Tetracycline (TC), a widely used veterinary antibiotic, is a pervasive emerging contaminant threatening crop production. Here, we employed integrated physiological, metabolomic, and transcriptomic analyses to decipher the response of soybean (Glycine max L.) to TC. While seed germination was unaffec...
2026-09-07 | MTBLS15077 | MetaboLights
TranscriptomicsGlobal transcriptome profiling of wild soybean (Glycine soja) roots under NaHCO3 treatment
Plant roots are the primary site of perception and injury for saline-alkaline stress. The current knowledge of the saline-alkaline stress transcriptome is most focused on salt (NaCl) stress. Only a little alkaline (NaHCO3) stress transcriptome is limited to one time point after stress. Time-course a...
ORGANISM(S): Glycine soja 
2010-08-14 | E-GEOD-17883 | biostudies-arrayexpress
MetabolomicsSoil legacy effects in Soybean Intercropping Enhance Tobacco Resistance to Fusarium Root Rot

Soil-borne diseases, with their high incidence and frequency in monoculture systems, pose a major challenge in contemporary agricultural production. Intercropping can promote beneficial soil legacy effects, thereby effectively mitigating the occurrence and damage of soil-borne diseases. In this s...

2025-09-05 | MTBLS12940 | MetaboLights
TranscriptomicsTranscription profiling of soybean roots at three time points after infection with soybean cyst nematodes
Parallel genome-wide expression profile of soybean and soybean cyst nematode at three points during infection 2, 5, 10 days post-inoculation.
ORGANISM(S): Glycine max 
2006-11-30 | E-MEXP-808 | biostudies-arrayexpress
MetabolomicsMechanisms of poly(butylene adipate-co-terephthalate) microplastic degradation in agricultural soil: Insights from the soybean rhizosphere

The increasing application of biodegradable mulch films in agriculture has raised concerns regarding the potential persistence of biodegradable microplastics (BMPs) in soil and their subsequent ecological impacts. Although these materials are designed to mineralize, their actual rates of breakdow...

2026-01-07 | MTBLS12524 | MetaboLights
TranscriptomicsTranscriptome profiles in compatible and incompatible interactions between soybean and Fusarium oxysporum
Fusarium oxysporum is one of the most common species causing soybean root rot and seedling blight in the U.S. In a recent study, significant variation in aggressiveness was observed among isolates of F. oxysporum collected from roots in Iowa, ranging from highly pathogenic to weakly or non-pathogeni...
ORGANISM(S): Glycine max 
2016-03-31 | E-GEOD-66861 | biostudies-arrayexpress
TranscriptomicsExpression data of Soybean (Glycine max) roots from different iron treatments.
Two Near Isogenic soybean (Glycine max) lines were grown in hydroponic conditions with either 50uM ferric nitrate or 100uM ferric nitrate. After 10 days, half the plants were harvested (total root tissue). At 12 days after planting, iron was added to plants grown in low iron conditions bringing th...
ORGANISM(S): Glycine max 
2010-09-06 | E-GEOD-22227 | biostudies-arrayexpress
TranscriptomicsExpression data of soybean accessions under different phosphorus treatments
Phosphorus is one of the most important macronutrients that is required for plant growth and development. However, stress under low-P conditions has become a limiting factor that affects crop yields and qualities. Plants have developed strategies to cope with this, while few genes associated with lo...
ORGANISM(S): Glycine max 
2016-03-08 | E-GEOD-78242 | biostudies-arrayexpress
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