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TranscriptomicsStimulation of BL2 cell line with lipopolysaccharide (LPS) for 6h
Identification of genes up or down regulated in LPS stimulated samples in comparison to control samples. 3 LPS stimulated samples vs. 3 controls were analyzed
ORGANISM(S): Homo sapiens 
2011-07-01 | E-GEOD-29700 | biostudies-arrayexpress
UnknownDTD: An R Package for Digital Tissue Deconvolution.
Not available
S-EPMC7074920 | biostudies-literature
UnknownCorrecting for natural isotope abundance and tracer impurity in MS-, MS/MS- and high-resolution-multiple-tracer-data from stable isotope labeling experiments with IsoCorrectoR.
Not available
S-EPMC6297158 | biostudies-literature
UnknownHarp: data harmonization for computational tissue deconvolution across diverse transcriptomics platforms.
Not available
S-EPMC12448907 | biostudies-literature
UnknownVirtual tissue expression analysis.
Not available
S-EPMC11631471 | biostudies-literature
TranscriptomicsAnalyzing synergistic and non-synergistic interactions in signalling pathways using Boolean Nested Effect Models
Understanding the structure and interplay of cellular signalling pathways is one of the great challenges in molecular biology. Boolean Networks can infer signalling networks from observations of protein activation. In situations where it is difficult to assess protein activation directly, Nested Eff...
ORGANISM(S): Homo sapiens 
2015-12-10 | E-GEOD-68761 | biostudies-arrayexpress
TranscriptomicsMolecular classification of mature aggressive B cell lymphoma using digital multiplexed gene expression on formalin-fixed paraffin-embedded biopsy specimens [FFPE]
The most frequent mature aggressive B-cell lymphomas are diffuse large B-cell lymphoma (DLBCL) and Burkitt lymphoma (BL). Patients suffering from molecularly defined BL (mBL) but treated with a regimen developed for DLBCL show an unfavorable outcome compared to mBL treated with chemotherapy regimens...
ORGANISM(S): Homo sapiens 
2013-09-25 | E-GEOD-48182 | biostudies-arrayexpress
TranscriptomicsMolecular classification of mature aggressive B cell lymphoma using digital multiplexed gene expression on formalin-fixed paraffin-embedded biopsy specimens [Frozen tissue]
The most frequent mature aggressive B-cell lymphomas are diffuse large B-cell lymphoma (DLBCL) and Burkitt lymphoma (BL). Patients suffering from molecularly defined BL (mBL) but treated with a regimen developed for DLBCL show an unfavorable outcome compared to mBL treated with chemotherapy regimens...
ORGANISM(S): Homo sapiens 
2013-09-25 | E-GEOD-48183 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of Sunitinib-treated but not untreated short-term serum-free cultures predict treatment response of human high-grade gliomas in vitro
High-grade gliomas are amongst the most deadly human tumors. Treatment results are overall disappointing. Nevertheless, in several trials around 20% of patients respond to therapy. Diagnostic strategies to identify those patients that will ultimately profit from a specific targeted therapy are urgen...
ORGANISM(S): Homo sapiens 
2014-10-07 | E-GEOD-51305 | biostudies-arrayexpress
UnknownAnomaly detection in mixed high-dimensional molecular data.
Not available
S-EPMC10457663 | biostudies-literature
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