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ProteomicsPopulus Palmitoylome - Proteomic Analysis of a Poplar Cell Suspension Culture Suggests a Major Role of Protein S-Acylation in Diverse Cellular Processes
The aim of this work was to identify S-acylated proteins in poplar. In order to achieve this, we have combined the acyl-biotin exchange method with a mass spectrometry based proteomic approach. To date, this is the only study on S-acylated proteins in a tree species. In total, we identified around 4...
ORGANISM(S): Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) 
2016-05-09 | PXD003735 | Pride
Mass spectrometry S-acylation Populus Spectral counting 
TranscriptomicsWound-induced neoblast specialization in S. mediterranea
We report the expression of mRNA transcripts in X1 neoblast isolated by FACS followin amputation of the head (anterior wounding) and amputation of the pharyx and tail (posterior wounding) at 0 and 48 hours RNA-sequencing of pre-pharyngeal X1 cells from anterior and posterior facing wounds at 0 and 4...
ORGANISM(S): Schmidtea mediterranea 
2014-08-19 | E-GEOD-57226 | biostudies-arrayexpress
ProteomicsSaprolegnia parasitica proteome
In this project, we made a comprehensive quantitative proteomic analysis of four defined developmental stages of S. parasitica (mycelium, primary cysts, secondary cysts and germinated cysts) to gain greater insight into the types of proteins specifically linked to each stage. A total of 2423 unique...
ORGANISM(S): Oomycetes 
2018-08-10 | PXD004695 | Pride
Secondary cysts Mycelium Oomycete Mass spectrometry Saprolegnia parasitica Primary cysts Germinated cyst Quantitative proteomics 
ProteomicsDetergent-resistant microdomains in Saprolegnia parasitica
Oomycete cells are surrounded by a polysaccharide rich cell wall matrix that, in addition to being essential for cell growth, also functions as protective ”armour”. It follows, that the enzymes responsible for the synthesis of the cell wall provide potential targets for disease management. Interesti...
ORGANISM(S): Saprolegnia parasitica 
2024-06-13 | PXD010817 | Pride
Mass spectrometry Saprolegnia parasitica Detergent-resistant microdomains Itraq Plasma membrane 
TranscriptomicsCross-talk between 4-1BB and TLR1-TLR2 signaling in CD8+ T cells regulates TLR2’s costimulatory effects
The activation of TLR-MyD88 (Toll like receptor- Myeloid differentiation factor 88) signaling within T cells functions as a potent costimulatory signal that boosts antitumor and antiviral responses. However, the molecular mechanisms underlying the costimulatory processes are poorly understood. We co...
ORGANISM(S): Mus musculus 
2016-06-14 | E-GEOD-79475 | biostudies-arrayexpress
TranscriptomicsThe Genetic Basis of Rapidly Evolving Male Genital Morphology in Drosophila.
We performed genome-wide expression assays comparing gene expression in the Drosophila melanogaster third larval instar genital imaginal disc between males and females. We used microarrays to compare the relative expression levels of five independent male versus female comparisons for each of two di...
ORGANISM(S): Drosophila melanogaster 
2011-07-20 | E-GEOD-26348 | biostudies-arrayexpress
UnknownAdeno-associated virus type 2-mediated gene transfer: role of cellular FKBP52 protein in transgene expression.
Not available
S-EPMC114465 | biostudies-literature
UnknownPrakash Chandra Srivastava
Not available
S-EPMC1122792 | biostudies-literature
TranscriptomicsTwo transcription factors are necessary for iron homeostasis in a salt-dwelling archaeon [ChIP-chip data]
Because iron toxicity and deficiency are equally life threatening, maintaining intracellular iron levels within a narrow optimal range is critical for nearly all known organisms. However, regulatory mechanisms that establish homeostasis are not well understood in organisms that dwell in environments...
ORGANISM(S): Halobacterium sp. NRC-1 
2011-06-02 | E-GEOD-29705 | biostudies-arrayexpress
UnknownPoly[μ2-aqua-aqua-[μ3-N-butyl-N-(2-hy-droxy-ethyl)di-thio-carbamato-κ(3) O,O':S]sodium].
Not available
S-EPMC4770959 | biostudies-literature
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