Stark S S - OmicsDI

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Unknown (1902)
Proteomics (129)
Transcriptomics (83)
Genomics (44)
Metabolomics (2)
Models (1)

Organisms

Homo sapiens (80)
Andropogon gerardi (38)
Bacteria (38)
Canis lupus familiaris (38)
Cnidaria (38)
Cricetulus griseus (38)
Eukaryota (38)
Fasciola (38)
Hepatitis B virus (38)
Human alphaherpesvirus 1 strain 17 (38)
Human alphaherpesvirus 1 strain KOS (38)
Human betaherpesvirus 5 (38)
Madurella mycetomatis (38)
Mesocricetus auratus (38)
Miscanthus x giganteus (38)
Mus musculus (38)
Mus musculus (16)
Drosophila melanogaster (10)
Schizosaccharomyces pombe (3)
Rattus norvegicus (2)
Drosophila willistoni (1)
Sarcophilus harrisii (1)
Synechocystis sp. PCC 6803 (1)
Schrenkiella parvula (1)
Drosophila ananassae (1)
Anopheles gambiae (1)
Solanum lycopersicum (1)
Saccharomyces cerevisiae (1)
Streptococcus pneumoniae TIGR4 (1)
Fusarium sinicum (1)

Organisms

Streptococcus pneumoniae (2)
Homo sapiens (2)
Mus musculus (1)

Repository

biostudies-arrayexpress (99)
PAXDB (88)
pride (38)
EGA (19)
ENA (8)
MassIVE (3)
geo (2)
MetaboLights (2)
FAIRDOMHub (1)

Tissue

Cell culture (12)
Epithelial cell (5)
Blood platelet (3)
Permanent cell line cell (3)
Blood plasma (2)
Fibroblast (2)
HEK-293 cell (2)
Neutrophil (2)
Platelet (2)
Blood (1)
Blood cell (1)
Bone marrow (1)
Brain (1)
Colon (1)
Early embryonic cell (1)
Liver (1)
Lung (1)
Macrophage (1)
Osteoblast (1)
Pancreas (1)
Pancreatic ductal cell (1)
Primary cell (1)

Disease

Cervix carcinoma (3)
Spinal muscular atrophy (1)
Rheumatoid arthritis (1)
Acute leukemia (1)
Breast cancer (1)
COVID-19 (1)
Cardiovascular system disease (1)
Cholestasis (1)
Colon cancer (1)
Developmental and epileptic encephalopathy 9 (1)
Disease free (1)
Mitochondrial metabolism disease (1)
Non-small cell lung carcinoma (1)
Pancreatic ductal adenocarcinoma (1)
Tauopathy (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (20)
Affinity purification coupled with mass spectrometry proteomics (7)
Bottom-up proteomics (4)
Data-dependent acquisition (3)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
SWATH MS (2)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (1)
All-ion fragmentation (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 2000 (5)
Q Exactive (2)
454 GS FLX (1)
Illumina Genome Analyzer II (1)
Illumina MiSeq (1)
Illumina NovaSeq 6000 (1)
TripleTOF 5600 (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2020 (91)
2010 (20)
2013 (17)
2015 (15)
2014 (15)
2023 (13)
2011 (9)
2012 (7)
2021 (7)
2016 (5)
2009 (5)
2026 (5)
2025 (4)
2022 (4)
2017 (4)
2006 (3)
2007 (2)
2024 (2)
2018 (2)
2008 (1)
2005 (1)
2019 (1)

UNIPROT ID/AC

14310_ARATH (3)
14311_ARATH (3)
14332_ARATH (3)
14333_ARATH (3)
14334_ARATH (3)
14335_ARATH (3)
14336_ARATH (3)
14337_ARATH (3)
14338_ARATH (3)
14339_ARATH (3)
1A112_ARATH (3)
2A5A_ARATH (3)
2A5B_ARATH (3)
2A5G_ARATH (3)
2AAA_ARATH (3)
2AAB_ARATH (3)
2AAG_ARATH (3)
2AB2A_ARATH (3)
2AB2C_ARATH (3)
2AB2D_ARATH (3)
2ABA_ARATH (3)
2ABB_ARATH (3)
3702.AT3G04400.1 (3)
3702.AT3G53750.1 (3)
3702.AT3G56800.1 (3)
3702.AT3G59540.1 (3)
3702.AT3G62840.1 (3)
3702.AT4G09800.1 (3)
3702.AT4G23570.3 (3)
3702.AT4G33865.1 (3)

CHEBI ID

CHEBI:6650 (2)
CHEBI:18012 (2)
CHEBI:72868 (1)
CHEBI:73765 (1)
CHEBI:9630 (1)
CHEBI:17818 (1)
CHEBI:85158 (1)
CHEBI:165803 (1)
CHEBI:24848 (1)
CHEBI:90333 (1)
CHEBI:28527 (1)
CHEBI:16384 (1)
CHEBI:42111 (1)
CHEBI:33508 (1)
CHEBI:17822 (1)
CHEBI:17234 (1)
CHEBI:18257 (1)
CHEBI:17417 (1)
CHEBI:28842 (1)
CHEBI:15428 (1)
CHEBI:17148 (1)
CHEBI:17754 (1)
CHEBI:15963 (1)
CHEBI:15741 (1)
CHEBI:65665 (1)
CHEBI:28044 (1)
CHEBI:16196 (1)
CHEBI:16010 (1)
CHEBI:17084 (1)
CHEBI:32816 (1)

Metabolite Name

Trihydroxy octadecenoic acid (TriHOME isomer II) (1)
Trihydroxy octadecenoic acid (TriHOME isomer I) (1)
Trihydroxy octadecadienoic acid (TriHODE isomer II) (1)
Dihydroxy eicosatetraenoic acid (DiHETE) (1)
Trihydroxy octadecadienoic acid (TriHODE isomer I) (1)
Alpha-Tomatine (1)
Acetyl tryptophan (1)
Feruloyl serotonin (1)
Indole acrylic acid (1)
Caffeoyl putrescine (1)
Feruloyl tyramine (1)
Coumaroyl tyramine (1)
Caffeoyl quinic acid (1)
Glyceric acid (1)
Pyruvic acid (1)
2-ketoglutaric acid (1)
2-hydroxyglutaric acid (1)
Ribitol (1)
5-oxoproline (1)
Lactic acid (1)
Serine (1)
Glycine (1)
Glycerol (1)
Succinic acid (1)
Fumaric acid (1)
Malic acid (1)
Rutin (1)
Putrescine (1)
Ornithine (1)
Fumaric acid (1)

First Public Date

2025 (2)
2024 (1)
2021 (1)
2020 (1)
2017 (1)
2015 (1)
2013 (1)

Classification

bacteria (2)

Study type

Transcription profiling by array (44)
ChIP-seq (16)
RNA-seq of non coding RNA (10)
RNA-seq of coding RNA (9)
Other (5)
Methylation profiling by array (4)
ChIP-chip by tiling array (2)
Genotyping by array (2)
Comparative genomic hybridization by array (2)
Transcription profiling by high throughput sequencing (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (227)
2024 (204)
2022 (200)
2023 (198)
2021 (188)
2020 (150)
2019 (118)
2018 (100)
2015 (83)
2017 (74)
2016 (73)
2014 (73)
2013 (69)
2011 (50)
2012 (48)
2010 (46)
2026 (30)
2009 (23)
2008 (18)
2007 (10)
2006 (8)
2001 (4)
2005 (3)
2004 (2)
2000 (2)

Lab affiliation

Centre for Gene Regulation and Expression, Sir James Black Centre, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH. UK. (2)
Director at Max Planck Institute of Biochemistry Department Proteomics und Signaltransduktion Am Klopferspitz 18, 82152 Martinsried (2)
Director, Translational Proteomics Research Unit, IRCM Director, Biomarker Pipeline for Precision Medicine Strategic Initiative Full IRCM Research Professor Full Research Professor, Department of Biochemistry and Molecular Medicine (accreditation for the Molecular Biology Programs), Université de Montréal Holder of the Bell-Bombardier Chair of Excellence Person in charge of responsible conduct of research, IRCM (2)
Australian Centre for Water and Environmental Biotechnology (formerly AWMC), University of Queensland (1)
Berlin Institute of Health (BIH) at Charité – Universitätsmedizin Berlin, BIH Center for Regenerative Therapies (BCRT), Experimental Immunotherapy (1)
Bioanalytical Mass spectroscopy Group, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany; Bioanalytics, Institute for Clinical Chemistry, University Medical Center Göttingen, Germany (1)
CNB-CSIC (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 0RE, UK (1)
Chief, Section of Research and Tissue Engineering, Department of Plastic Surgery, University Medical Center Freiburg, Germany (1)
Clinical Neuroproteomics Unit Navarrabiomed Proteored-ISCIII Pamplona-Spain (1)
Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, 233 S 10th Street, BLSB 826, Philadelphia, PA, 19104 (1)
Department of Cell Biology and Molecular Genetics University of Maryland (1)
Department of Chemistry, Stanford University Stanford ChEM-H (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Dr. Elke Hammer Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung 17487 Greifswald Germany (1)
Dr. Uwe Linne Philipps-Universität Marburg Fachbereich Chemie und Synmikro Gerätezentrum Massenspektrometrie und Elementanalaytik Hans-Meerwein-Str. 4 35032 Marburg, GERMANY (1)
Goethe-Universität Frankfurt, Georg-Speyer-Haus, Paul-Ehrlich-Str. 42-44, Frankfurt am Main, GERMANY (1)
Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia 6009, Australia (1)
Harvard Institutes of Medicine 2nd floor, Room 221 4 Blackfan Circle Boston, MA 02115 (1)
ISAS Otto-Hahn-Str. 6b 44227 Dortmund Germany (1)
Institute for Diabetes and Cancer (IDC), Helmholtz Centre Munich, German Research Center for Environmental Health, Neuherberg, Germany (1)
Institute for Systems Biology (1)
Krefting Research Centre, Institute of Medicine at Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden (1)
LMU Klinikum Medizinische Klinik und Poliklinik I Campus Großhadern | Marchioninistraße 15 | 81377 München https://www.lmu-klinikum.de/ (1)
Max Perutz Labs, Vienna, Austria (1)
Microbiology and Immunology, Department of Cell and Molecular Biology, Biomedical Centre, Uppsala University, Sweden (1)
Proteomics Core Facility (1)
Proteomics Platform Max Delbrück Center for Molecular Medicine in the Helmholtz Association Robert-Rössle-Straße 10 13125 Berlin, Germany (1)
Research Institute of Molecular Pathology, Vienna BioCenter, Vienna, Austria (1)
School of Life Sciences University of Dundee (1)

2162 Results

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