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MetabolomicsTranscriptomic and metabolomic changes in postharvest sugarbeet roots reveal widespread metabolic changes in storage and identify genes potentially responsible for respiratory sucrose loss
Endogenous metabolism is primarily responsible for losses in sucrose content and processing quality in postharvest sugarbeet roots. The genes responsible for this metabolism and the transcriptional changes that regulate it, however, are largely unknown. To identify genes and metabolic pathways that ...
2024-05-15 | MTBLS1106 | MetaboLights
TranscriptomicsGene expression profiling of developing cassava storage roots
Mechanisms related to the development of cassava storage roots and starch accumulation remain largely unknown. To evaluate genome-wide expression patterns during cassava tuberization, a 60-mer oligonucleotide microarray representing 20,840 cassava genes was designed to identify differentially expres...
ORGANISM(S): Manihot esculenta 
2011-05-13 | E-GEOD-25813 | biostudies-arrayexpress
MetabolomicsPlot diversity differentially affects the chemical composition of leaves, roots and root exudates in four subtropical tree species

Plants produce thousands of compounds, collectively called the metabolome, which mediate interactions with other organisms. The metabolome of an individual plant may change according to the number and nature of these interactions. We tested the hypothesis that tree diversity level affects the met...

2021-08-09 | MTBLS1968 | MetaboLights
ProteomicsProteomic and metabolic profile analysis of low-temperature storage responses in Ipomoea batata Lam. tuberous roots
Our proteomic and metabolic profile analysis of sweetpotato roots stored at low temperature reveal that the antioxidant enzymes activities, proline and especially soluble sugar content were significantly increased. Most of the DEPs were implicated in phenylpropanoids and followed by starch and sucro...
ORGANISM(S): Ipomoea batatas 
2021-09-09 | PXD017728 | Pride
Proteometabolomic Chilling tolerance Low-temperature storage Sweetpotato Starch metabolism 
ProteomicsProteomics of cassava storage roots before and after shoot pruning
Cassava (Manihot esculenta Crantz) is a food security crop for approximately 800 million people, primarily in developing economies. Cassava root yield is determined by the allocation of photoassimilated carbon within the plant, yet there is limited molecular and biochemical information about source-...
ORGANISM(S): Manihot esculenta (Cassava) (Jatropha manihot) 
2026-04-01 | PXD045690 | Pride
Manihot esculenta Storage roots Pruning Cassava 
UnknownMetabolic diversity in sweet potato (Ipomoea batatas, Lam.) leaves and storage roots.
Not available
S-EPMC6312539 | biostudies-literature
ProteomicsEfficient sugar utilization and transition from oxidative to substrate-level phosphorylation in high starch storage roots of African cassava genotypes
Cassava’s storage roots represent one of the most important sources of nutritional carbohydrates worldwide. Particularly, smallholder farmers in Sub-Saharan Africa depend on this crop plant, where resilient and yield-improved varieties are of vital importance to support steadily increasing populatio...
ORGANISM(S): Manihot esculenta (Cassava) (Jatropha manihot) 
2023-06-21 | PXD038813 | Pride
Cassava 
UnknownParallel evolution of storage roots in morning glories (Convolvulaceae).
Not available
S-EPMC5975488 | biostudies-literature
TranscriptomicsGene expression profiling of developing cassava storage roots
Mechanisms related to the development of cassava storage roots and starch accumulation remain largely unknown. To evaluate genome-wide expression patterns during cassava tuberization, a 60-mer oligonucleotide microarray representing 20,840 cassava genes was designed to identify differentially expres...
ORGANISM(S): Manihot esculenta 
2011-05-13 | GSE25813 | GEO
UnknownTranscriptome Analysis of Storage Roots and Fibrous Roots of the Traditional Medicinal Herb Callerya speciosa (Champ.) ScHot.
Not available
S-EPMC4972434 | biostudies-literature
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