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TranscriptomicsBacillus cereus strain 31673
Comparative Genomic Hybridization. Analysis of genomic content of closely related Bacillus species. Refer to individual records for strain information. Refer to platform and individual sample records for experimental protocols.
ORGANISM(S): Bacillus anthracis str. Ames 
2010-06-05 | E-GEOD-568 | biostudies-arrayexpress
ProteomicsIdentification of type strain-specific diagnostic peptides of the Bacillus cereus group
The Bacillus cereus group consists of eight very closely related species and comprises both harmless and human pathogenic species. Yet, methods to rapidly and accurately distinguish these species are currently lacking as we demonstrate that classical matrix-assisted laser desorption ionization-time ...
ORGANISM(S): Bacillus cereus (strain ATCC 14579 / DSM 31) Bacillus weihenstephanensis NBRC 101238 = DSM 11821 Bacillus toyonensis BCT-7112 Bacillus thuringiensis serovar berliner ATCC 10792 Bacillus pseudomycoides DSM 12442 Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) Bacillus mycoides DSM 2048 
2018-02-07 | PXD003669 | Pride
Bacillus cereus group Type strains Diagnostic peptides Lc-ms/ms 
TranscriptomicsGenome variation and conserved regulation identify genomic regions responsible for strain specific phenotypes of metabolic syndrome in rats
We developed a method to prioritise strain-specific haplotypes by integrating genomic variation and genomic regulatory data predicted to be involved in specific phenotypes. To identify genomic regions associated with metabolic syndrome (MetS), a disorder of energy utilization and storage affecting s...
ORGANISM(S): Rattus norvegicus 
2017-08-03 | E-MTAB-5939 | biostudies-arrayexpress
TranscriptomicsArray-Based Genomic Comparative Hybridization Analysis of Field Strains of Mycoplasma hyopneumoniae
Mycoplasma hyopneumoniae is the causative agent of porcine enzootic pneumonia and a major factor in the porcine respiratory disease complex. A clear understanding of the mechanisms of pathogenesis does not exist although it is clear that M. hyopneumoniae adheres to porcine ciliated epithelium by act...
ORGANISM(S): Mycoplasma hyopneumoniae 
2010-05-27 | E-GEOD-8306 | biostudies-arrayexpress
TranscriptomicsEffects of Sex, Strain, and Energy Intake on Hallmarks of Aging in Mice
Calorie restriction (CR) is the most robust non-genetic intervention to universally delay the onset of age-related diseases and extend mean and maximum lifespan. However, species, strain, sex, diet, age of onset, and level of CR are emerging as important variables to consider for a successful CR res...
ORGANISM(S): Mus musculus 
2016-06-27 | E-GEOD-81959 | biostudies-arrayexpress
TranscriptomicsHfq virulence regulation in enterohemorhagic Escherichia coli O157:H7 strain 86-24
Escherichia coli O157:H7 is a food-borne pathogen that causes bloody diarrhea and hemolytic uremic syndrome. Hfq is an sRNA chaperone protein that is involved in post-transcriptional regulation of virulence genes in pathogenic bacteria. In EHEC strain EDL933, Hfq acts a negative regulator of the loc...
ORGANISM(S): Escherichia coli O157:H7 
2012-01-06 | E-GEOD-30893 | biostudies-arrayexpress
TranscriptomicsComparative genomic hybridization of genomic DNA from two B. bronchiseptica strains and one B. pertussis strain and sequenced reference genomes by comparative genome hybridization (CGH)
Genomic DNA from two B. bronchiseptica strains and one B. pertussis strain were compared to the sequenced reference genomes by comparative genome hybridization (CGH).
ORGANISM(S): Bordetella bronchiseptica 
2006-03-31 | E-MEXP-399 | biostudies-arrayexpress
ProteomicsFasting upregulates the monocarboxylate transporter Mct1 at the rat blood-brain barrier through Ppar d activation
Fasting is increasingly recognized as a potential therapeutic intervention in the field of neurology and psychiatry. However, its impact upon the blood-brain barrier (BBB), which strictly regulates the cerebral uptake of a wide range of endogenous compounds and drugs, is unknown. In this study we us...
ORGANISM(S): Cellular Organisms 
2024-08-15 | PXD044587 | JPOST Repository
ProteomicsGeLC-MS/MS of H37Rv and two clinical isolates of Mycobacterium tuberculosis
Clinical isolates were made available from an extensive longitudinal collection of M. tuberculosis isolates circulating in the Western Cape of South Africa. Clinical isolates SAWC3651 and SAWC3517, belonging to the LAM (lineage 4.3) genotype and IS6110 family 14 and 9, respectively, and M. tubercul...
ORGANISM(S): Mycobacterium Tuberculosis (ncbitaxon:1773) 
2017-06-30 | MSV000081205 | MassIVE
TranscriptomicsVitamin D Prevents Cognitive Decline and Enhances Hippocampal Synaptic Function in Aging Rats
Vitamin D is an important calcium-regulating hormone with diverse functions in numerous tissues including the brain. Increasing evidence suggests that vitamin D may play a role in maintaining cognitive function and that vitamin D deficiency may accelerate age-related cognitive decline. Using aging...
ORGANISM(S): Rattus norvegicus 
2014-09-23 | E-GEOD-61326 | biostudies-arrayexpress
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