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TranscriptomicsGene expression analysis of urine sediment: evaluation for potential noninvasive markers of interstitial cystitis/bladder pain syndrome
Purpose: Determine if gene expression profiles in urine sediment could provide non-invasive candidate markers for painful bladder syndrome (PBS) with and/or without Hunner lesions. Materials and Methods: Fresh catheterized urine was collected and centrifuged from control (n = 5), lesion-free (n = 5)...
ORGANISM(S): Homo sapiens 
2012-02-06 | E-GEOD-28242 | biostudies-arrayexpress
TranscriptomicsGene Level Expression Profiling: Activity dependent genes in the olfactory epithelium
Gene level analysis of RNA samples from mice olfactory epithelium Gene expression profiling in the olfactory epithelium was performed to obtain a better understanding of the processes mediating activity dependent gene regulation We analyzed total RNA from olfactory epithelium tissue from 3 mice at 5...
ORGANISM(S): Mus musculus 
2014-04-21 | E-GEOD-49998 | biostudies-arrayexpress
TranscriptomicsComparison of steady state mRNA levels between equine articular cartilage and ten other equine tissues
A tissue survey of gene expression was conducted using microarray-based transcriptional profiling to compare equine articular cartilage to 10 other normal adult horse tissues. The ten comparative tissues were bladder, cerebellum, kidney, liver, lung, lymph node, muscle, placental villous, spleen, a...
ORGANISM(S): Equus caballus 
2011-01-27 | E-GEOD-23862 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse olfactory epithelium to determine the identity of genes regulated at 3 d post-olfactory bulbectomy in the olfactory mucosa of carrier-injected Ccl3-/- mice compared with carrier-injected C57BL/6 mice
The aim was to determine the identity of genes regulated at 3 d post-olfactory bulbectomy in the olfactory mucosa of carrier-injected Ccl3-/- mice compared with carrier-injected C57BL/6 mice. Total RNA from the OE was hybridized to Affymetrix microarrays. A number of chemokine-, cytokine-, and gro...
ORGANISM(S): Mus musculus 
2007-10-13 | E-GEOD-1680 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of equine chondrocyte de-differentiation in culture
Monolayer cultures of primary chondrocytes undergo morphological changes that have been broadly characterized as de-differentiation. Transcriptional profiling was used to evaluate changes in gene expression during this process. Articular cartilage was harvested from a single Standardbred horse; the ...
ORGANISM(S): Equus caballus 
2012-05-31 | E-GEOD-14255 | biostudies-arrayexpress
UnknownA Probabilistic Approach to Estimate the Temporal Order of Pathway Mutations Accounting for Intra-Tumor Heterogeneity.
Not available
S-EPMC11240401 | biostudies-literature
TranscriptomicsTranscription profiling of mouse olfactory epithelium frpm Harlequin mutants compared to littermate controls
Microarray analysis of gene expression in the olfactory epithelium of Harlequin mouse as a model of oxidative-stress induced neurodegeneration of olfactory sensory neurons Experiment Overall Design: Olfactory epithelium from Harlequin mutant mice and littermate control mice was microdissected for RN...
ORGANISM(S): Mus musculus 
2008-06-14 | E-GEOD-6485 | biostudies-arrayexpress
UnknownSDA: a semi-parametric differential abundance analysis method for metabolomics and proteomics data.
Not available
S-EPMC6798423 | biostudies-literature
TranscriptomicsOntogeny of Innate Immunity in Oral Mucosa - Cross Sectional
mRNA microarray profiling was performed on healthy gingival biopsies from nonhuman primates (NHPs) (between 3 and 23 years old, and periodontitis gingival biopsies from NHPs (12-22 years old)
ORGANISM(S): Macaca mulatta 
2014-10-15 | E-MTAB-1977 | biostudies-arrayexpress
TranscriptomicsGene expression atlas for mouse olfactory sensory neurons
Identification of all genes expressed by mouse olfactory sensory neurons; genes expressed in mature neurons, immature neurons, or both were distinguished. Independent validation of enrichment ratio values supported by statistical assessment of error rates was used to build a database of statistical...
ORGANISM(S): Mus musculus 
2011-11-02 | E-GEOD-33368 | biostudies-arrayexpress
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