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TranscriptomicsDegradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L. ssp. indica)
MicroRNAs (miRNAs) and small interfering RNAs (siRNAs) regulate gene expression in eukaryotes. Plant miRNAs modulate their targets mainly via messenger RNA (mRNA) cleavage. Small RNA targets have been extensively investigated in Arabidopsis using computational prediction, experimental validation, an...
ORGANISM(S): Oryza sativa Indica Group 
2010-01-01 | E-GEOD-19050 | biostudies-arrayexpress
TranscriptomicsExpression data of young panicles from microspore mother cell to meiosis of rice
Male sterility is an important trait in hybrid crop breeding. Thermo-sensitive genic male sterility (TGMS) lines, which are male-sterile at restrictive (high) temperatures but convert to male-fertile at permissive (low) temperatures, have been widely utilized in two-line hybrid rice breeding. Howeve...
ORGANISM(S): Oryza sativa Indica Group 
2016-08-01 | E-GEOD-42367 | biostudies-arrayexpress
ProteomicsProteomics analysis of silencing of FGGY gene on colorectal cancer cells
Proteomics analysis was used to screen differentially expressed proteins after knockdown of FGGY in HCT116 cells
ORGANISM(S): Homo Sapiens 
2025-01-08 | PXD059574 |
TranscriptomicsNext-generation sequencing facilitates quantitative analysis of AcKLF5 and unAcKLF5 transcriptomes in xenografts of DU-145 cell line
KLF5 possesses both tumor-suppressing and tumor-promoting activities, though the mechanism controlling these opposing functions is unknown. In cultured non-cancerous epithelial cells, KLF5 converts from pro-proliferative to anti-proliferative activity upon TGFβ-induced acetylation, which sequential...
ORGANISM(S): Homo sapiens 
2014-03-29 | E-GEOD-56343 | biostudies-arrayexpress
GenomicsPAX5 overexpression is not enough to reestablish the mature B-cell phenotype in classical Hodgkin lymphoma (ChIP-Seq)
In lymphomas derived from mature B cells the expression of the transcription factor PAX5 is maintained whereas classical Hodgkin lymphoma displays significantly reduced PAX5 expression despite its derivation from mature B cells. To elucidate the functional role of PAX5 in classical Hodgkin lymphoma,...
ORGANISM(S): Homo sapiens 
2013-07-30 | E-GEOD-44551 | biostudies-arrayexpress
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