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MetabolomicsDynamic utilization of low-molecular-weight organic substrates across a microbial growth rate gradient

AIM: Low-molecular-weight organic substances (LMWOSs) are at the nexus between micro-organisms, plant roots, detritus and the soil mineral matrix. The nominal oxidation state of carbon (NOSC) has been suggested as a potential parameter for modelling microbial uptake rates of LMWO...

2023-08-14 | MTBLS3558 | MetaboLights
MetabolomicsPronounced uptake and metabolism of organic substrates by diatoms revealed by pulse-labeling metabolomics
Diatoms contribute as a major group of microalgae to approximately 20% of the global carbon fixation. In the plankton, these algae are exposed to a plethora of metabolites, especially when competing algae are lysed. In line with evidence that these phototrophs can also engage in heterotrophy we aske...
2021-12-09 | MTBLS2333 | MetaboLights
MetabolomicsMapping the metabolism of five amino acids in bloodstream form Trypanosoma brucei using U-13C-labelled substrates and LC–MS
The metabolism of the parasite Trypanosoma brucei has been the focus of numerous studies since the 1940s. Recently it was shown, using metabolomics coupled with heavy-atom isotope labelled glucose, that the metabolism of the bloodstream form parasite is more complex than previously thought. The pres...
2019-06-24 | MTBLS624 | MetaboLights
MetabolomicsAmino acids and TCA substrates in hematopoietic cells (Part1)
Not available
ORGANISM(S): Mus musculus 
ST002124 | MetabolomicsWorkbench
MetabolomicsAmino acids and TCA substrates in hematopoietic cells (Part4)
Not available
ORGANISM(S): Mus musculus 
ST002127 | MetabolomicsWorkbench
MetabolomicsAmino acids and TCA substrates in hematopoietic cells (Part3)
Not available
ORGANISM(S): Mus musculus 
ST002126 | MetabolomicsWorkbench
MetabolomicsAmino acids and TCA substrates in hematopoietic cells (Part2)
Not available
ORGANISM(S): Mus musculus 
ST002125 | MetabolomicsWorkbench
MetabolomicsUrolithin A (UroA) acts at CYP1A1/1B1 substrates leading to enhanced aryl hydrocarbon receptor (AHR) activity in vivo
Not available
ORGANISM(S): Mus musculus 
ST002481 | MetabolomicsWorkbench
GenomicsSubstrates in constructed wetlands
Substrates in constructed wetlands Raw sequence reads
PRJNA1073051 | ENA
ProteomicsSystematic Identification of SHP2 Phosphatase Substrates
Phosphatases play essential roles in normal cell physiology and diseases like cancer. The challenges of studying phosphatases have limited our understanding of their substrates, molecular mechanisms, and unique functions within highly complicate networks. Here we introduce a novel strategy using sub...
ORGANISM(S): Homo sapiens (Human) 
2022-09-20 | PXD028404 | Pride
Phosphoproteomics Tyrosine phosphatase substrates Lc-ms Shp2 
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