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UnknownAnthocyanin accumulation in the red-fleshed grape germplasm ZhongShan-HongYu through bulked segregant analysis and RNA-seq.
Not available
S-EPMC12576772 | biostudies-literature
TranscriptomicsQuantitative transcriptome analysis of a high-GSH producing Saccharomyces cerevisiae and the wild type based on the second generation sequencing.
The mutant Saccharomyces cerevisiae Y518 generated much more intracellular glutathione (GSH) than its counterpart dose. The RNA-seq based global transcriptome analysis was performed for exploring the potential mechanisms. Statistical analysis indicated that 1125 differentially expressed genes (fold-...
ORGANISM(S): Saccharomyces cerevisiae 
2014-06-07 | E-GEOD-47787 | biostudies-arrayexpress
UnknownSix new species of zombie-ant fungi from Yunnan in China.
Not available
S-EPMC10173673 | biostudies-literature
UnknownThe comparison effect on earthworms between conventional and biodegradable microplastics.
Not available
S-EPMC11415699 | biostudies-literature
ProteomicsSILAC-based Quantitative Proteomic Analysis of Secretome between Activated and Reverted Hepatic Stellate Cells
Activated hepatic stellate cell (HSC) is the main myofibroblast cell in the liver fibrosis(LF). An important characteristic of the recovery of LF is not only the apoptosis of activated HSCs but also reversal of myofibroblast-like phenotype to a quiescent-like phenotype. Understanding the changes of ...
ORGANISM(S): Homo sapiens (Human) 
2014-08-11 | PXD000773 | Pride
Lx-2  activation  reversion  secretome 
OtherSILAC-based quantitative proteomic analysis of secretome between activated and reverted hepatic stellate cells.
Data from ProteomeXchange, PXD ID: PXD000773. File: zhanghongyu_20110913_13.mzml. Published as part of . From the Abstract: {{i}} Activated hepatic stellate cell (HSC) is the main myofibroblast cell in the liver fibrosis (LF). An important characteristic of the recovery of LF is not only the apopto...
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM32310002866 | GPMDB
Resource Reanalysis 
TranscriptomicsA transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies
Whole-genome transcriptional profiles of rice cell types, isolated by laser-capture microdissection. The first comprehensive multi-organ cell type transcriptome atlas from a plant, with 40 distinct cell types from several developmental stages of seeds, shoots and roots, reveals cell-specific promote...
ORGANISM(S): Oryza sativa 
2010-05-19 | E-GEOD-13161 | biostudies-arrayexpress
ProteomicsRBIS regulates ribosome biogenesis to affect progression in lung adenocarcinoma
Transient overexpress RBIS and control plasmid in H293T cells and collect cells after 48 hours, then performed IP assays using anti-Flag beads subjected samples to LC-MSMS to screen proteins interacting with RBIS.
ORGANISM(S): Homo Sapiens 
PXD057090 |
ProteomicsProteomic analysis of human lung cancer cells
Here, we performed a differential proteomic study of human lung cancer cell lines. The iTRAQ quantitative labeling technique was employed for quantification of nuclear proteins by mass spectrometry. Experiments were performed in duplicate and differentially expressed nuclear proteins (global FDR<1%...
ORGANISM(S): Homo Sapiens 
2019-10-17 | PXD015861 |
TranscriptomicsSingle-Base Resolution Methylomes of Silkworms and Functional Importance of Gene Methylation in Insects Revealed by Ultra-High-Throughput Sequencing
Single-base resolution DNA methylomes have been accomplished for both Arabidopsis and human cells which have high genome methylation levels by Illumina ultra-high-throughput bisulfite sequencing technology (MethylC-Seq). Here by combining MethylC-Seq and biological replicate strategies we generated ...
ORGANISM(S): Bombyx mori 
2010-04-09 | E-GEOD-18315 | biostudies-arrayexpress
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