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TranscriptomicsIntegration of tomato reproductive developmental landmarks and expression profiles, and the effect of SUN on fruit shape
Universally accepted landmark stages are necessary to highlight key events in tomato reproductive development. In this study, we provide a description of floral and fruit development in a red-fruited closely related wild relative of tomato, Solanum pimpinellifolium accession LA1589. We use establis...
ORGANISM(S): Solanum pimpinellifolium 
2010-05-18 | E-GEOD-15453 | biostudies-arrayexpress
TranscriptomicsSun and shade leaves_2x ambient ozone_020806
Tropospheric ozone causes severe oxidative stress in plants. To investigate the transcriptional responsiveness of adult trees to ozone, fully-expanded sun and shade leaves of mature beech trees were harvested at four time points over the entire vegetation period in 2005 and 2006. Microarray analyses...
ORGANISM(S): Fagus sylvatica 
2011-10-20 | E-GEOD-17416 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of human epidermal and dermal samples with aging and sun exposure
Genome wide DNA methylation profiling of epidermal and dermal samples obtained from sun-exposed and sun-protected body sites from younger (<35 years old) and older (>60 years old) individuals. The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles acro...
ORGANISM(S): Homo sapiens 
2015-03-23 | E-GEOD-51954 | biostudies-arrayexpress
TranscriptomicsSun and shade leaves_2x ambient ozone_210605
Tropospheric ozone causes severe oxidative stress in plants. To investigate the transcriptional responsiveness of adult trees to ozone, fully-expanded sun and shade leaves of mature beech trees were harvested at four time points over the entire vegetation period in 2005 and 2006. Microarray analyses...
ORGANISM(S): Fagus sylvatica 
2011-10-20 | E-GEOD-17413 | biostudies-arrayexpress
TranscriptomicsSun and shade leaves_2x ambient ozone_050805
Tropospheric ozone causes severe oxidative stress in plants. To investigate the transcriptional responsiveness of adult trees to ozone, fully-expanded sun and shade leaves of mature beech trees were harvested at four time points over the entire vegetation period in 2005 and 2006. Microarray analyses...
ORGANISM(S): Fagus sylvatica 
2011-10-20 | E-GEOD-17411 | biostudies-arrayexpress
TranscriptomicsSun and shade leaves_2x ambient ozone_190905
Tropospheric ozone causes severe oxidative stress in plants. To investigate the transcriptional responsiveness of adult trees to ozone, fully-expanded sun and shade leaves of mature beech trees were harvested at four time points over the entire vegetation period in 2005 and 2006. Microarray analyses...
ORGANISM(S): Fagus sylvatica 
2011-10-20 | E-GEOD-17415 | biostudies-arrayexpress
TranscriptomicsSun and shade leaves_2x ambient ozone_120505
Tropospheric ozone causes severe oxidative stress in plants. To investigate the transcriptional responsiveness of adult trees to ozone, fully-expanded sun and shade leaves of mature beech trees were harvested at four time points over the entire vegetation period in 2005 and 2006. Microarray analyses...
ORGANISM(S): Fagus sylvatica 
2011-10-20 | E-GEOD-17414 | biostudies-arrayexpress
GenomicsEpigenome analysis of human epidermal samples with aging and sun exposure
Genome wide DNA methylation profiling of epidermal samples obtained from sum-exposed and sun-protected body sites from younger (<35 years old) and older (>60 years old) individuals. Bisulphite converted DNA from 12 samples was sequenced using Illumina HiSeq.
ORGANISM(S): Homo sapiens 
2015-03-23 | E-GEOD-52972 | biostudies-arrayexpress
TranscriptomicsRNA-seq Analysis of MoRFX1-dependent Genes in Magnaporthe oryzae 70-15
Purpose: The goals of this study are to find out the genes regulated directly or indirectly by the regulatory factor X protein MoRfx1 by RNA-seq in the rice blast fungus Methods: Mycelial mRNAs of the wild type strain 70-15, ΔMorfx1 incubated in H2O at 25˚C for 4 h, in triplicate independently for...
ORGANISM(S): Magnaporthe oryzae 
2016-07-20 | E-GEOD-65296 | biostudies-arrayexpress
MetabolomicsUntargeted liver metabolomic profiling of hepatocyte-specific Serpine2-knockout mice following ischemia-reperfusion injury
Untargeted metabolomics was performed to investigate hepatic metabolic changes associated with hepatocyte-specific Serpine2 deletion after ischemia-reperfusion injury. Eight liver samples were collected from Serpine2-floxed control mice (NC) and hepatocyte-specific Serpine2-knockout mice (HKO), with...
2026-10-11 | MTBLS15998 | MetaboLights
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