Sun Zheng Z - OmicsDI

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Unknown (4715)
Proteomics (137)
Metabolomics (26)
Transcriptomics (18)
Genomics (6)

Organisms

Andropogon gerardi (72)
Bacteria (72)
Canis lupus familiaris (72)
Chromatiales bacterium OalgGamma1 (72)
Clavibacter nebraskensis NCPPB 2581 (72)
Cnidaria (72)
Ensifer adhaerens (72)
Fasciola (72)
Human alphaherpesvirus 1 strain 17 (72)
Human alphaherpesvirus 1 strain KOS (72)
Human betaherpesvirus 5 (72)
Human herpesvirus 2 strain 186 (72)
Mesocricetus auratus (72)
Miscanthus x giganteus (72)
Mus musculus (72)
Panicum virgatum (72)
Homo sapiens (52)
Mus musculus (20)
Arabidopsis thaliana (4)
Rattus norvegicus (2)
Tardigrada (2)
Oryza sativa (1)
Bos taurus (1)
Bombyx mori (1)
Candida albicans (1)
Fasciola hepatica (1)
Macaca fascicularis fascicularis (1)
Manihot esculenta (1)
Oryctolagus cuniculus (1)
Trichonephila (1)

Repository

pride (72)
iProX (62)
MetaboLights (24)
biostudies-arrayexpress (20)
EGA (4)
GNPS (2)
MassIVE (2)
jPOST (1)

Tissue

Cell culture (27)
Epithelial cell (5)
Liver (5)
Testis (4)
Colon (3)
Hepatocyte (3)
Blood plasma (2)
Brain (2)
Permanent cell line cell (2)
B cell (1)
Bacterial protein (1)
Bladder urothelial cell (1)
Blood (1)
Blood serum (1)
Brown adipose tissue (1)
Burkitt lymphoma cell (1)
Cell suspension culture (1)
Cerebral cortex (1)
Cerebrospinal fluid (1)
Diploid cell (1)
Fibroblast (1)
Flag leaf (1)
Flower bud (1)
Gastrointestinal system epithelium (1)
Intestinal epithelial cell (1)
Leaf (1)
Lung (1)
Lung squamous cell carcinoma cell (1)
Lymph node (1)
Mantle (1)

Disease

Colon cancer (4)
Adult hepatocellular carcinoma (2)
Breast cancer (2)
Bacterial infectious disease (1)
Bladder transitional cell papilloma (1)
Lung carcinoma (1)
Polycystic Kidney (1)
Thyroid cancer (1)

Technology Type

Mass Spectrometry (72)
Shotgun proteomics (28)
Mass spectrometry (23)
Bottom-up proteomics (14)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-dependent acquisition (8)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Data-independent acquisition (4)
Gel-based experiment (3)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
Immunopeptidomics (1)
Proteogenomics (1)
SRM/MRM (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (10)
Liquid Chromatography MS - positive - reverse phase (9)
Liquid Chromatography MS - alternating - hilic (4)
Liquid Chromatography MS - alternating - reverse phase (4)
Liquid Chromatography MS - negative - hilic (3)
Illumina NovaSeq X (2)
Q Exactive HF (2)
TripleTOF 6600 (2)
Gas Chromatography MS - (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina Genome Analyzer II (1)
Illumina HiSeq 2000 (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Xevo QTof MS (Waters) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative (1)
Gas Chromatography MS - positive (1)

Publication Date

2023 (33)
2025 (31)
2024 (27)
2022 (18)
2026 (17)
2020 (17)
2021 (11)
2014 (7)
2019 (7)
2012 (3)
2017 (3)
2015 (2)
2011 (2)
2016 (1)
2013 (1)
2010 (1)
2009 (1)
2018 (1)

CHEBI ID

CHEBI:16708 (9)
CHEBI:16335 (9)
CHEBI:17368 (9)
CHEBI:16704 (8)
CHEBI:7916 (8)
CHEBI:16750 (8)
CHEBI:17154 (8)
CHEBI:17748 (7)
CHEBI:17821 (7)
CHEBI:30832 (7)
CHEBI:15741 (7)
CHEBI:15428 (7)
CHEBI:18012 (7)
CHEBI:30915 (7)
CHEBI:16737 (7)
CHEBI:15756 (7)
CHEBI:30769 (7)
CHEBI:28238 (6)
CHEBI:46961 (6)
CHEBI:17992 (6)
CHEBI:17066 (6)
CHEBI:16610 (6)
CHEBI:55328 (6)
CHEBI:30887 (6)
CHEBI:17750 (6)
CHEBI:17533 (6)
CHEBI:15891 (6)
CHEBI:18183 (6)
CHEBI:18132 (6)
CHEBI:16040 (6)

Metabolite Name

Adenine (5)
Xanthine (5)
Uridine (5)
Inosine (5)
L-Histidine (4)
Deoxycholic acid (4)
Quinic acid (4)
Adenosine (4)
Palmitic acid (4)
N-Acetyl-L-phenylalanine (4)
Glyceraldehyde (4)
Guanosine (4)
Thymidine (4)
Sucrose (4)
L-Tyrosine (4)
Hypoxanthine (4)
(R)-3-Hydroxybutyric acid (3)
Isoxanthopterin (3)
L-Alanine (3)
Maleic acid (3)
L-Asparagine (3)
Taurine (3)
Xanthosine (3)
Gentisic acid (3)
4-Hydroxybenzaldehyde (3)
Citraconic acid (3)
Cholic acid (3)
Pimelic acid (3)
N-Acetyl-L-glutamic acid (3)
Citric acid (3)

Study type

RNA-seq of coding RNA (8)
Transcription profiling by array (6)
RNA-seq of coding RNA from single cells (2)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (783)
2024 (670)
2022 (636)
2023 (606)
2021 (559)
2020 (369)
2019 (251)
2018 (202)
2017 (132)
2015 (114)
2016 (104)
2026 (102)
2014 (65)
2013 (41)
2012 (35)
2011 (29)
2009 (16)
2010 (10)
2008 (5)
2003 (2)
2007 (1)
2006 (1)
2005 (1)
2004 (1)

Lab affiliation

The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (4)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China (2)
Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center (2)
Department of Urology, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, Guangdong, P. R. China (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
1 Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. 2 Center of Clinical Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China. 3 State Key Laboratory Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. (1)
1)Chongqing Medical University;2) Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment, Chongqing University Cancer Hospital (1)
1.Department of Colorectal Surgery, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. 2.Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. (1)
1Cancer Institute, the Second Affiliated Hospital, and Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou 310029, China 2Cancer Center, Zhejiang University, Hangzhou 310058, China 3Research Center for Life Science and Human Health, Binjiang Institute of Zhejiang University, Hangzhou 310053, China (1)
Beijing Institute of Pharmacology and Toxicology (1)
Center for RNA Biology: From Genome to Therapeutics Department of Biochemistry and Biophysics University of Rochester Medical Center Rochester, NY, 14642, USA (1)
China Agricultural University (1)
College of Pharmacy, Jinan University, Guangzhou 510632, P. R. China (1)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China. (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China (1)
Department of Biology, University of Florida (1)
Department of Chemistry, Michigan State University, MI 48824, USA (1)
Department of Clinical Laboratory Medicine, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (1)
Department of Clinical Laboratory, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong 510120, China. (1)
Department of Clinical Laboratory, Shenshan Central Hospital, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Shanwei, China (1)
Department of Human Anatomy, Histology and Embryology, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Infectious Diseases and the Key Lab of Endogenous Infection, Shenzhen Nanshan People's Hospital and The 6th Affiliated Hospital of Shenzhen University Health Science Center, Shenzhen 518052, China (1)
Department of Orthopedics, the Eighth Affiliated Hospital of Sun Yat-sen University, Shenzhen 518003, P.R. China (1)
Department of Pathology, The First Affiliated Hospital, Sun Yat-sen University (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, and State Key Laboratory of Oncogenes and Related Genes and Chinese Academy of Medical Sciences Research Unit (NO.2019RU043), Shanghai Cancer Institute, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
Department of Pharmacology, University of Virginia School of Medicine, Charlottesville, Virginia 22908, USA (1)
Huazhong University of Science and Technology (1)
Innovation Center of the Sixth Affiliated hospital, School of Life Sciences, Sun Yat-senUniversity, Guangzhou (1)

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Qing-Re-Xiao-Zheng-Yi-Qi formula relieves kidney damage and activates mitophagy in diabetic kidney disease.

Not available

S-EPMC9807870 | biostudies-literature

ZIPK mediates endothelial cell contraction through myosin light chain phosphorylation and is required for ischemic-reperfusion injury.

Not available

S-EPMC6662964 | biostudies-literature

Comprehensive Dataset of Interactors for the Entire PARP Family Using TurboID Proximity Labeling

We present a comprehensive proteomic dataset of binding proteins for all 17 members of the poly(ADP-ribose) polymerase (PARP) family, generated using the TurboID proximity labeling technique in HEK293T cells under controlled conditions. This dataset encompasses 6,325 proteins that interact with PARP...

ORGANISM(S): Homo sapiens (Human)

2024-07-15 | PXD052745 | Pride