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Transcriptomics
(3335)
Proteomics
(467)
Genomics
(348)
Metabolomics
(116)
Other
(23)
Unknown
(21)
Models
(1)
Organisms
Mus musculus
(1446)
Homo sapiens
(1258)
Rattus norvegicus
(303)
Drosophila melanogaster
(84)
Danio rerio
(67)
Apis mellifera
(45)
Macaca mulatta
(40)
Gallus gallus
(28)
Sus scrofa
(26)
Listeria monocytogenes
(24)
Taeniopygia guttata
(20)
Pan troglodytes
(20)
Macaca fascicularis
(15)
Pimephales promelas
(14)
Streptococcus pneumoniae
(13)
Ovis aries
(13)
Carassius auratus
(12)
Enterococcus faecalis
(12)
Salmo salar
(10)
Bos taurus
(10)
Staphylococcus aureus
(9)
Oncorhynchus mykiss
(9)
Colinus virginianus
(8)
Haemophilus influenzae
(7)
Xenopus laevis
(7)
Streptococcus mutans
(6)
Anguilla anguilla
(6)
Monodelphis domestica
(6)
Enterococcus faecium
(6)
Haemophilus influenzae R2866
(5)
Organisms
Ixodes scapularis
(2)
Ornithodoros turicata
(1)
Rhipicephalus microplus
(1)
Repository
biostudies-arrayexpress
(3508)
MassIVE
(322)
EGA
(176)
MetaboLights
(115)
jPOST
(59)
iProX
(35)
PAXDB
(31)
PanoramaPublic
(20)
GPMDB
(16)
ENA
(5)
EVA
(3)
PeptideAtlas
(3)
pride
(2)
FAIRDOMHub
(1)
GNPS
(1)
Tissue
Saliva
(1)
Synganglion
(1)
Disease
Normal
(16)
None
(4)
Glioblastoma
(3)
Alzheimer's disease
(2)
Rett syndrome
(2)
Rheumatoid arthritis
(2)
Parkinson's disease
(2)
Glioblastoma multiforme
(2)
Temporal lobe epilepsy
(2)
Reference
(2)
Multiple sclerosis
(1)
Huntington's disease mouse model
(1)
HIV encephalitis
(1)
Cocaine addiction
(1)
Nurr1 lentivirus
(1)
HIV-associated dementia
(1)
Early-life seizures
(1)
EAE
(1)
Sham infected
(1)
Pseudorabies virus infected
(1)
Diffuse large B-cell lymphoma
(1)
Major depression
(1)
Oligodendroglioma
(1)
Pneumococcal meningitis
(1)
Subarachnoid hemorrhage NOS
(1)
Schizophrenia
(1)
CAMN
(1)
Glioma
(1)
Sham
(1)
Pancreatic ductal adenocarcinoma
(1)
Technology Type
Mass spectrometry
(72)
Mass spectrometry assay
(34)
NMR spectroscopy
(8)
ILLUMINA, Illumina MiSeq
(3)
ILLUMINA, Illumina HiSeq 2000
(3)
Illumina HiSeq 2000
(3)
Illumina HiSeq 2000, ILLUMINA
(3)
Illumina HiSeq 2500, ILLUMINA
(2)
ILLUMINA, Illumina HiSeq 2500
(2)
NMR spectroscopy assay
(2)
Bottom-up proteomics
(2)
Mass Spectrometry
(2)
ILLUMINA, Illumina MiSeq, Illumina HiSeq 2000
(1)
Illumina HiSeq 2500, ILLUMINA, Illumina HiSeq 2000
(1)
Illumina HiSeq 2500
(1)
Illumina Genome Analyzer IIx
(1)
Illumina MiSeq
(1)
Illumina Genome Analyzer II
(1)
Data-dependent acquisition
(1)
Data-independent acquisition
(1)
Instrument Platform
Illumina NovaSeq 6000
(133)
Illumina HiSeq 2500
(60)
NextSeq 500
(53)
Illumina HiSeq 4000
(39)
Illumina HiSeq 2000
(29)
NextSeq 2000
(15)
Illumina NovaSeq X
(14)
Axon GenePix 4000B scanning hardware
(12)
NextSeq 550
(12)
Illumina Genome Analyzer II
(9)
Illumina MiSeq
(8)
Ion Torrent Proton
(5)
Illumina HiSeq 3000
(5)
Illumina Genome Analyzer IIx
(4)
Generation III Array Scanner [Amersham]
(4)
Illumina HiSeq 1500
(4)
454 GS FLX+
(3)
G2505A DNA microarray scanner [Agilent]
(3)
N/A
(3)
BD Rhapsody
(2)
PromethION
(2)
BeadBug Benchtop homogenizer
(2)
G2565BA DNA microarray scanner
(2)
Scanning of was performed on an Axon 4000B scanner
(2)
Not applicable
(2)
FUJIFILM BAS-5000 scanning hardware
(2)
Sequel
(2)
Anaerobic workstation with airlock
(2)
GenePix Personal 4100A [Axon Instruments]
(2)
GenePix 4000A [Axon Instruments]
(2)
Publication Date
2013
(418)
2010
(387)
2014
(370)
2012
(357)
2015
(348)
2011
(319)
2016
(267)
2008
(256)
2009
(158)
2023
(152)
2025
(134)
2022
(128)
2024
(112)
2007
(111)
2026
(87)
2021
(85)
2019
(85)
2020
(81)
2018
(66)
2017
(57)
2006
(43)
2005
(32)
2004
(8)
2003
(4)
UNIPROT ID/AC
1433E_MOUSE
(12)
2AAA_MOUSE
(12)
3HIDH_MOUSE
(12)
6PGL_MOUSE
(12)
AATC_MOUSE
(12)
AATM_MOUSE
(12)
ACON_MOUSE
(12)
ACTN4_MOUSE
(12)
ADK_MOUSE
(12)
ADT1_MOUSE
(12)
ALBU_MOUSE
(12)
ALDH2_MOUSE
(12)
ALDOA_MOUSE
(12)
ANXA6_MOUSE
(12)
AP2M1_MOUSE
(12)
ARL8A_MOUSE
(12)
AT1A1_MOUSE
(12)
ATP5H_MOUSE
(12)
ATPA_MOUSE
(12)
ATPB_MOUSE
(12)
ATPO_MOUSE
(12)
BIP_MOUSE
(12)
BT3L4_MOUSE
(12)
C1QBP_MOUSE
(12)
C1TC_MOUSE
(12)
CAH2_MOUSE
(12)
CALR_MOUSE
(12)
CAP1_MOUSE
(12)
CAPR1_MOUSE
(12)
CATB_MOUSE
(12)
ENSEMBL ID
ENSDARG00000000103
(1)
ENSDARG00000000472
(1)
ENSDARG00000000516
(1)
ENSDARG00000001127
(1)
ENSDARG00000001241
(1)
ENSDARG00000001431
(1)
ENSDARG00000001437
(1)
ENSDARG00000001578
(1)
ENSDARG00000001676
(1)
ENSDARG00000001710
(1)
ENSDARG00000001788
(1)
ENSDARG00000001915
(1)
ENSDARG00000001950
(1)
ENSDARG00000001993
(1)
ENSDARG00000001994
(1)
ENSDARG00000002021
(1)
ENSDARG00000002400
(1)
ENSDARG00000002414
(1)
ENSDARG00000002467
(1)
ENSDARG00000002480
(1)
ENSDARG00000002549
(1)
ENSDARG00000002564
(1)
ENSDARG00000002571
(1)
ENSDARG00000002589
(1)
ENSDARG00000002632
(1)
ENSDARG00000002768
(1)
ENSDARG00000002791
(1)
ENSDARG00000003032
(1)
ENSDARG00000003035
(1)
ENSDARG00000003144
(1)
CHEBI ID
CHEBI:15891
(21)
CHEBI:30769
(20)
CHEBI:16865
(19)
CHEBI:16737
(19)
CHEBI:15354
(19)
CHEBI:15741
(18)
CHEBI:17154
(18)
CHEBI:16919
(18)
CHEBI:17368
(18)
CHEBI:16870
(17)
CHEBI:17754
(17)
CHEBI:15428
(17)
CHEBI:17596
(17)
CHEBI:20067
(17)
CHEBI:16704
(16)
CHEBI:16856
(16)
CHEBI:32816
(16)
CHEBI:17268
(16)
CHEBI:16027
(16)
CHEBI:17822
(15)
CHEBI:16708
(15)
CHEBI:16857
(15)
CHEBI:7916
(15)
CHEBI:17553
(15)
CHEBI:16015
(15)
CHEBI:18012
(15)
CHEBI:17202
(14)
CHEBI:22652
(14)
CHEBI:17750
(14)
CHEBI:6650
(14)
Metabolite Name
Hypoxanthine
(21)
Inosine
(20)
Taurine
(19)
Citric acid
(17)
Guanosine
(17)
Creatinine
(17)
Creatine
(17)
Adenine
(16)
Xanthine
(16)
Uridine
(16)
Guanine
(15)
Uracil
(13)
Niacinamide
(13)
Glutathione
(13)
Thymidine
(13)
Ornithine
(12)
Cytidine
(12)
Glycerophosphocholine
(12)
L-Tyrosine
(12)
Citrulline
(11)
ADP
(11)
Serotonin
(11)
Xanthosine
(11)
Pantothenic acid
(11)
Gluconic acid
(11)
Myo-Inositol
(11)
L-Glutamine
(11)
L-Phenylalanine
(11)
Glycerol
(10)
Kynurenic acid
(10)
First Public Date
2014
(3)
2022
(1)
2015
(1)
Study type
Transcription profiling by array
(2217)
RNA-seq of coding RNA
(501)
Methylation profiling by array
(124)
ChIP-seq
(100)
RNA-seq of coding RNA from single cells
(77)
Unknown experiment type
(65)
RNA-seq of non coding RNA
(64)
Methylation profiling by high throughput sequencing
(51)
Comparative genomic hybridization by array
(37)
Other
(34)
Transcription profiling by RT-PCR
(24)
RNA-seq of total RNA
(24)
Genotyping by array
(19)
ChIP-chip by tiling array
(17)
Transcription profiling by SAGE
(16)
MicroRNA profiling by array
(13)
DNA-seq
(13)
Animal - High-throughput sequencing
(10)
Cell line - High-throughput sequencing
(8)
Animal - One-color microarray
(7)
Transcription profiling by tiling array
(7)
ChIP-chip by array
(7)
CLIP-seq
(6)
Single nucleus RNA sequencing
(6)
Cell line - One-color microarray
(5)
Spatial transcriptomics by high-throughput sequencing
(5)
ATAC-seq
(5)
Human - High-throughput sequencing
(4)
High-throughput sequencing
(4)
MicroRNA profiling by high throughput sequencing
(3)
Release Date
2013
(417)
2010
(386)
2014
(367)
2012
(357)
2015
(344)
2011
(319)
2016
(257)
2008
(256)
2009
(159)
2007
(111)
2022
(70)
2026
(60)
2025
(60)
2021
(47)
2019
(47)
2023
(45)
2020
(45)
2018
(38)
2017
(35)
2006
(34)
2005
(32)
2024
(31)
2004
(8)
2003
(4)
Lab affiliation
ANSES, INRAE, Ecole Nationale Vétérinaire d’Alfort, UMR BIPAR, Laboratoire de Santé Animale, 94700 Maisons-Alfort, France
(1)
Vector-Pathogen-Host Interaction Unit, Laboratory of Malaria and Vector Research, NIAID/NIH, Rockville, Maryland 20852, USA
(1)
Tags
xref:PubMed:30904537
(1)
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Behavioral Manipulation of Ixodes scapularis by Ehrlichia muris eauclairensis: Implications for Tick-Borne Disease Transmission
To understand how EME influence tick behavior, we analyzed the tick nervous system; testing for the presence of EME in the synganglion, then performing proteomic studies on the synganglion during resting, and attachment/feeding phases.
ORGANISM(S):
Ixodes scapularis (Black-legged tick) (Deer tick)
Ehrlichia muris
Mus musculus (Mouse)
2025-05-21
|
PXD060563
|
Pride
Ixodes scapularis
Synganglion
Eme
Dia
Ehrlichia muris eauclarensis
Lfq
Tick
Nymph
Ehrlichia
Cite
Mevalonate-Farnesal Biosynthesis in Ticks: Comparative Synganglion Transcriptomics and a New Perspective.
Not available
S-EPMC4785029
|
biostudies-literature
Cite
Transcriptome of the synganglion in the tick Ixodes ricinus and evolution of the cys-loop ligand-gated ion channel family in ticks.
Not available
S-EPMC9219234
|
biostudies-literature
Cite
Prediction of G protein-coupled receptor encoding sequences from the synganglion transcriptome of the cattle tick, Rhipicephalus microplus.
Not available
S-EPMC5138280
|
biostudies-literature
Cite
Transcriptome of the female synganglion of the black-legged tick Ixodes scapularis (Acari: Ixodidae) with comparison between Illumina and 454 systems.
Not available
S-EPMC4116169
|
biostudies-literature
Cite
CFW
Transcriptome of the synganglion in adult ticks, Ixodes ricinus
PRJEB40724
|
ENA
Cite
Enlisting the
Ixodes scapularis
Embryonic ISE6 Cell Line to Investigate the Neuronal Basis of Tick-Pathogen Interactions.
Not available
S-EPMC7828734
|
biostudies-literature
Cite
Ornithodoros turicata
Ornithodoros turicata Transcriptome or Gene expression
PRJNA281459
|
ENA
Cite
Ixodes scapularis strain:Wikel
Ixodes scapularis strain:Wikel Transcriptome or Gene expression
PRJNA242857
|
ENA
Cite
Identification, Baculoviral Expression, and Biochemical Characterization of a Novel Cholinesterase of
Amblyomma americanum
(Acari: Ixodidae).
Not available
S-EPMC10178864
|
biostudies-literature
Cite
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