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Analysis of patient-specific nucleotide variants is a cornerstone of personalised medicine. Although only 2% of the genomic sequence is protein-coding, mutations occurring in these regions have the potential to influence protein structure and may have severe impact on disease aetiology. Of special i...
ORGANISM(S): Homo sapiens (Human) 
2021-11-04 | PXD018305 | Pride
Integration of Individualised Proteogenomics Datasets to Analyse Single Amino Acid Variants in Cancer
The most commonly used genome annotation processes are to a great extent based on computational methods. However, those can only predict genes that have been described earlier or that have sequence signatures indicative of a gene function. We reported a synonymous proteogenomic approach for experime...
ORGANISM(S): Escherichia coli 
2015-09-15 | PXD002473 | Pride
Synthetic genome recoding offers a powerful approach to imparting new capabilities to organisms. While monumental achievements have been made in prokaryotes, genome-wide synonymous codon compression in eukaryotes remains challenging due to limited understanding of "design rules" and the physiologica...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2026-09-24 | PXD083804 | Pride
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