Tan Chen C - OmicsDI

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Unknown (3815)
Proteomics (126)
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Genomics (21)
Metabolomics (13)
Models (2)
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Organisms

Homo sapiens (86)
Schizosaccharomyces pombe (69)
Sinorhizobium meliloti BL225C (69)
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Saccharomyces cerevisiae (69)
Staphylococcus aureus (69)
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Caenorhabditis elegans (2)
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cellular organisms (1)
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Organisms

Caenorhabditis elegans (1)

Repository

biostudies-arrayexpress (77)
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Mass Spectrometry (69)
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Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
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LTQ Orbitrap Elite (2)
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6540 Q-TOF LC/MS (Agilent) (1)
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Liquid Chromatography MS - positive - hilic (1)

Publication Date

2013 (28)
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2006 (1)

CHEBI ID

CHEBI:17568 (6)
CHEBI:16359 (6)
CHEBI:16015 (6)
CHEBI:28716 (6)
CHEBI:16828 (6)
CHEBI:15727 (5)
CHEBI:16335 (5)
CHEBI:15355 (5)
CHEBI:17509 (5)
CHEBI:17750 (5)
CHEBI:16467 (5)
CHEBI:18019 (5)
CHEBI:18050 (5)
CHEBI:17405 (5)
CHEBI:32816 (5)
CHEBI:16027 (5)
CHEBI:16919 (5)
CHEBI:17895 (5)
CHEBI:17295 (5)
CHEBI:17596 (5)
CHEBI:17351 (5)
CHEBI:17368 (5)
CHEBI:16796 (4)
CHEBI:30813 (4)
CHEBI:30805 (4)
CHEBI:18101 (4)
CHEBI:18132 (4)
CHEBI:16344 (4)
CHEBI:16708 (4)
CHEBI:16750 (4)

Metabolite Name

Inosine (6)
Azelaic acid (5)
Hypoxanthine (5)
Uracil (4)
Melatonin (4)
Guanine (4)
Proline (4)
Guanosine (4)
Creatine (4)
Isoxanthopterin (3)
Leucine (3)
AMP (3)
Valine (3)
Betaine (3)
Sinapine (3)
Carnosine (3)
Kynurenic acid (3)
Xanthosine (3)
Arginine (3)
Pipecolic acid (3)
Asparagine (3)
Adenosine (3)
Riboflavin (3)
L-Tryptophan (3)
Isoleucine (3)
Adenine (3)
Uric acid (3)
Cytidine (3)
Xanthine (3)
Uridine (3)

First Public Date

2014 (1)

Modelling Approach

Other (1)
Ordinary differential equation model (1)

Lab affiliation

School of Optometry, The Hong Kong Polytechnic University (2)
Department of Clinical Laboratory, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, China. The Key Laboratory of Molecular Biology of Infectious Diseases designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China. (2)
The Bone Biology and Disease Laboratory, School of Biomedical Sciences, The University of Western Australia (2)
College of Horticulture, Hunan Agricultural University (2)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
westlake.edu.cn (2)
St. Jude Children's Research Hospital (2)
School of Basic Medical Science, Central South University (1)
Key Laboratory of Medical Electrophysiology of the Ministry of Education, and Medical Electrophysiological Key Laboratory of Sichuan Province, Institute of Cardiovascular Research, Southwest Medical University, Luzhou, Sichuan 646000, China Department of Cardiovascular Medicine, the Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan 646000, China (1)
Beth Israel Deaconess Medical Center, Harvard Medical School, Broad Institute (1)
The Center for Chemical Biology, Drug Discovery and Design Center, State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China (1)
State Key Laboratory of Natural Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 211198, China (1)
State Key Laboratory of Common Mechanism Research for Major Disease, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China. (1)
Head of Proteomics CRUK Cambridge Institute Cambridge University Robinson Way Cambridge CB2 0RE UK Email: clive.d’santos@cruk.cam.ac.uk Phone: +44 1223 769677 (1)
No.892, Yuanda 2 Road, furong district, changsha，Hunan province (1)
Singapore Immunology Network (SIgN), Agency for Science, Technology and Research, Singapore 138648, Singapore (1)
Proteomics Resource Center, The Rockefeller University, New York, 10065, NY, USA (1)
College of Science, Mathematics, and Technology, Wenzhou-Kean University (1)
Key Laboratory of Ocular Fundus Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College (1)
BGI-Shenzhen (1)
Divisions of Pulmonary Biology, Molecular Cardiovascular Biology and Developmental Biology Department of Pediatrics Cincinnati Children's Hospital Medical Center Cincinnati, OH 45229 (1)
Research Center for Parasites & Vectors, College of Veterinary Medicine, Hunan Agricultural University, Changsha 410128, PR China (1)
Acupuncture-moxibustion and Orthopedic College, Hubei University of Chinese Medicine, Wuhan, China (1)
Cancer Research Institute, Xiangya Basic Medical College, Central South University, No. 110 Xiangya Road, Kaifu District, Changsha City, Hunan Province (1)
Key Laboratory of Medical Electrophysiology of the Ministry of Education, and Medical Electrophysiological Key Laboratory of Sichuan Province, Institute of Cardiovascular Research, Southwest Medical University Department of Cardiovascular Medicine, the Affiliated Hospital of Southwest Medical University (1)
Murdoch Children's Research Institute, Melbourne, Australia (1)
School of Bioscience and Bioengineering, South China University of Technology, Guangzhou, P. R. China (1)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, China (1)
The Bone Biology and Disease Laboratory, The University of Western Australia (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou 215002, China (1)

IsPrivate

False (2)

Submitter Keywords

Machine Learning Model (1)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (58)
RNA-seq of coding RNA (7)
ChIP-seq (3)
Comparative genomic hybridization by array (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (567)
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2023 (471)
2021 (425)
2020 (299)
2019 (219)
2018 (191)
2017 (154)
2016 (125)
2014 (101)
2015 (94)
2026 (76)
2013 (67)
2012 (43)
2011 (33)
2010 (23)
2008 (11)
2009 (5)
2005 (4)
2007 (3)
2004 (2)
2003 (2)
2006 (1)
2002 (1)
1998 (1)

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Responses to P. aeruginosa infection - Shapira

Synchronized C. elegans cultures were prepared using standard techniques (http://cmgm.stanford.edu/~kimlab/index_methods.html). Live young adult worms were split between NG plates pre-seeded with the non-pathogenic E. coli strain OP50 or the Pseudomonas aeruginosa clinical isolate PA14 and incubated...

ORGANISM(S): Caenorhabditis elegans

2010-07-01 | E-GEOD-5584 | biostudies-arrayexpress

Proteomics Reveals the Potential Mechanism of Tanshinone IIA Promoting the Ex Vivo Expansion of Human Bone Marrow Mesenchymal Stem Cells.

Bone marrow mesenchymal stem cells (BMSCs) is a promising cell type for tissue engineering, however, the application of BMSCs are largely hampered for the limited number harvested from bone marrow cells. The methods or strategies that focused on promoting the capacity of BMSCs expansion ex vivo beco...

ORGANISM(S): Homo sapiens (Human)

2022-11-28 | PXD036093 | Pride