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Proteomics (304)
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Homo sapiens (289)
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biostudies-arrayexpress (293)
pride (209)
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Technology Type

Mass Spectrometry (209)
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Mass spectrometry (54)
Bottom-up proteomics (37)
Data-dependent acquisition (28)
Affinity purification coupled with mass spectrometry proteomics (21)
Mass spectrometry assay (15)
NMR spectroscopy (11)
Gel-based experiment (11)
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SWATH MS (9)
Chemical cross-linking coupled with mass spectrometry proteomics (6)
SRM/MRM (6)
Top-down proteomics (6)
All-ion fragmentation (3)
DiaPASEF (2)
Metaproteomics (1)
Proteogenomics (1)
RNA mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (28)
Liquid Chromatography MS - positive - reverse phase (27)
Liquid Chromatography MS - positive - hilic (17)
Liquid Chromatography MS - negative - hilic (11)
Nuclear Magnetic Resonance (NMR) - (7)
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Bruker (4)
Illumina HiSeq 2000 (3)
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Liquid Chromatography MS - negative (3)
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Illumina HiSeq 4000 (2)
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Thermo Fischer-Orbitrap Fusion Tribrid (1)

Publication Date

2025 (67)
2022 (58)
2012 (55)
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UNIPROT ID/AC

A0A0A0MS51 (14)
A5A3E0 (14)
B4DPR2 (14)
B4E3A4 (14)
B7Z9A0 (14)
H0Y5C6 (14)
I3L4N8 (14)
J3KPS3 (14)
P00488 (14)
P01024 (14)
P02042 (14)
P02671 (14)
P02671-2 (14)
P02675 (14)
P02768 (14)
P02775 (14)
P02776 (14)
P02788 (14)
P04040 (14)
P04075 (14)
P04075-2 (14)
P04259 (14)
P04264 (14)
P04275 (14)
O96020 (1)
P11802 (1)
P24864 (1)
P24941 (1)
P42771 (1)
P46527 (1)

ENSEMBL ID

ENSG00000170477 (7)
ENSG00000229353 (3)
ENSG00000147251 (1)

CHEBI ID

CHEBI:17596 (28)
CHEBI:17368 (26)
CHEBI:16704 (24)
CHEBI:15428 (23)
CHEBI:16750 (22)
CHEBI:15741 (21)
CHEBI:15891 (21)
CHEBI:17568 (21)
CHEBI:15354 (20)
CHEBI:15756 (20)
CHEBI:16708 (20)
CHEBI:30769 (20)
CHEBI:16015 (19)
CHEBI:16040 (19)
CHEBI:16449 (19)
CHEBI:16737 (19)
CHEBI:25017 (19)
CHEBI:28044 (19)
CHEBI:16335 (18)
CHEBI:16919 (18)
CHEBI:17351 (18)
CHEBI:17750 (18)
CHEBI:17509 (17)
CHEBI:18012 (17)
CHEBI:18186 (17)
CHEBI:18237 (17)
CHEBI:27266 (17)
CHEBI:16027 (16)
CHEBI:16393 (16)
CHEBI:50211 (1)

Metabolite Name

Hypoxanthine (20)
Choline (17)
Taurine (17)
Uracil (16)
Adenine (15)
Adenosine (15)
Cytosine (15)
Inosine (15)
Phenylalanine (15)
Uridine (15)
Creatinine (14)
Leucine (14)
Linoleic acid (14)
Glycine (13)
Isoleucine (13)
L-Tyrosine (13)
Valine (13)
Xanthine (13)
Betaine (12)
L-Phenylalanine (12)
L-Proline (12)
Guanosine (11)
L-Histidine (11)
L-Tryptophan (11)
Palmitic acid (11)
Threonine (11)
Tyrosine (11)
Alanine (10)
Creatine (10)
Deoxyinosine (10)

IsPrivate

False (2)

First Public Date

2024 (1)
2023 (1)

Modelling Approach

Differential equation model (1)
Ordinary differential equation model (1)

Study type

Transcription profiling by array (141)
RNA-seq of coding RNA (65)
ChIP-seq (19)
Comparative genomic hybridization by array (14)
Methylation profiling by high throughput sequencing (11)
Methylation profiling by array (9)
Other (6)
MicroRNA profiling by array (5)
Unknown experiment type (4)
RNA-seq of non coding RNA (4)
Transcription profiling by tiling array (3)
RNA-seq of coding RNA from single cells (2)
RNA-seq of total RNA (2)
ChIP-chip by tiling array (1)
Cell line - One-color microarray (1)
Human - One-color microarray (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
Genotyping by array (1)
Proteomic profiling by array (1)
Genotyping by high throughput sequencing (1)

Release Date

2025 (2216)
2022 (1955)
2024 (1807)
2023 (1779)
2021 (1487)
2020 (1048)
2019 (788)
2018 (618)
2017 (524)
2016 (495)
2015 (431)
2026 (353)
2014 (312)
2013 (197)
2012 (187)
2011 (146)
2010 (125)
2009 (102)
2008 (49)
2007 (35)
2005 (18)
2006 (12)
2004 (8)
2003 (5)
2002 (4)
2001 (3)
2000 (2)

Lab affiliation

College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
Department of Neurobiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA (3)
Key Laboratory of Tropical Marine Bio-resources and Ecology,South China Sea Institute of Oceanology, Chinese Academy of Sciences (3)
Medical Basic Research Innovation Center for Cardiovascular and Cerebrovascular Diseases, Ministry of Education, Nanjing Medical University, Nanjing, Jiangsu, China (3)
Memorial Sloan Kettering Cancer Center (3)
Shenzhen People’s Hospital (3)
State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Sun Yat-sen University Cancer Center, Guangzhou 510060, China (3)
Xiamen University (3)
Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. (2)
Central South University (2)
Chemistry Department, Columbia University in the City of New York (2)
Cyrus Tang Medical Institute, Soochow University, Suzhou 215123, China. (2)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (2)
Emory University (2)
Guangzhou Medical University (2)
Human Phenome Institute,Zhangjiang FudanInternational Innovation Center, Fudan UniversityShanghai, 201203, China. (2)
Nanjing Med Univ, State Key Lab Reprod Med, Dept Histol & Embryol, 140 Hanzhong Rd, Nanjing 210029, Jiangsu, Peoples R China. (2)
No. 2 West Yuanmingyuan Road, Haidian District, Beijing (2)
Proteomics Unit Navarrabiomed, Pamplona, Spain (2)
School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou, 510006, Guangdong, P.R. China. (2)
Shenzhen Hospital of Southern Medical University (2)
South China Sea Institute of Oceanology, Chinese Academy of Sciences (2)
West China Second University Hospital, Sichuan University (2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
1)Chongqing Medical University;2) Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment, Chongqing University Cancer Hospital (1)
1. Nephrology Department of Guilin No. 924 Hospital, Guangxi Key laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research, 541002, Guilin, Guangxi, People’s Republic of China. 2. Clinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), 518020, Shenzhen, Guangdong, People’s Republic of China. (1)
1Department of Chemistry, University of California, Riverside (1)
1State Key Laboratory of Digital Medical Engineering, Department of Otolaryngology Head and Neck Surgery, Zhongda Hospital, School of Life Sciences and Technology, School of Medicine, Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University, Nanjing 210096, China.2 Co-Innovation Center of Neuroregeneration, Nantong University, Nantong 226001, China. (1)
Anhui Province Key Laboratory of Medical Physics and Technology, Institute of Health and Medical Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China University of Science and Technology of China, Hefei, Anhui 230026, P. R. China Hefei Cancer Hospital, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China Precision Medicine Research Laboratory of Anhui Province, Hefei, Anhui 230088, P. R. China (1)
Assistant Professor DEPARTMENT OF OBSTETRICS & GYNAECOLOGY Faculty of Medicine The University of HOng Kong (1)

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R-ChIP Using Inactive RNase H Reveals Dynamic Coupling of R-loops with Transcriptional Pausing at Gene Promoters.

Not available

S-EPMC5957070 | biostudies-literature

Differences between the binding modes of enantiomers S/R-nicotine to acetylcholinesterase.

Not available

S-EPMC9059617 | biostudies-literature

Global coupling of R-loop dynamics with RNA polymerase II modulates gene expression and early development of Drosophila.

Not available

S-EPMC11602159 | biostudies-literature

UPLC-MS/MS Determination of Twelve Ginsenosides in Shenfu Tang and Dushen Tang.

Not available

S-EPMC6662505 | biostudies-literature

The oncometabolite R-2-hydroxyglutarate inhibits microglial activation via the FTO/NF-κB pathway.

Not available

S-EPMC12683333 | biostudies-literature

TIMMA-R: an R package for predicting synergistic multi-targeted drug combinations in cancer cell lines or patient-derived samples.

Not available

S-EPMC4443685 | biostudies-literature

Data on correlation among LAI, T/R, anthocyanin and starch content in purple fleshed sweetpotato during different growth stages.

Not available

S-EPMC6187010 | biostudies-literature

Proximity labeling identifies a repertoire of site-specific R-loop modulators.

Not available

S-EPMC8748879 | biostudies-literature

LncRNA AABR07033564.1-encoded protein AABR40 protects BMECs from OGD/R-induced pyroptosis via BNIP3-mediated mitophagy

This dataset comprises 4D-DIA quantitative proteomics data from primary rat brain microvascular endothelial cells (BMECs) subjected to Oxygen-Glucose Deprivation/Reoxygenation (OGD/R) injury. The aim of the study was to investigate the protective mechanism of the novel protein AABR40, encoded by the...

ORGANISM(S): Rattus Rattus

2026-03-23 | PXD076051 |

Tracing pluripotency of human early embryos and embryonic stem cells by single cell RNA-seq

Find the casual relationship between gene expression network and cellular phenotype at single cell resolution. We collected donated human pre-implatation embryos, and the embryonic stem cells derived from them, isolate individual cells, prepared single cell cDNAs, and sequenced them by HiSeq2000. Th...

ORGANISM(S): Homo sapiens

2013-08-10 | E-GEOD-36552 | biostudies-arrayexpress

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15099 Results

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