Tang Yang Y - OmicsDI

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Unknown (7818)
Proteomics (150)
Transcriptomics (40)
Metabolomics (26)
Genomics (9)

Organisms

Andropogon gerardi (87)
Homo sapiens (61)
Mus musculus (18)
Zea mays (4)
Arabidopsis thaliana (3)
Saccharomyces cerevisiae (2)
Drosophila melanogaster (2)
Bos taurus (2)
Brassica oleracea (1)
Deinococcus gobiensis (1)
Arachis hypogaea (1)
Drosophila simulans (1)
Oryza sativa Indica Group (1)
Rattus norvegicus (1)
Acinetobacter baumannii A424 (1)
Amaryllidaceae (1)
Boehmeria tricuspis (1)
Cricetulus griseus (1)
Escherichia coli (1)
Gallus gallus (1)
Glaesserella parasuis (1)
Lentinula edodes (1)
Macaca mulatta (1)
Malus domestica (1)
Moschus berezovskii (1)
Mycolicibacterium smegmatis MC2 51 (1)
Rattus rattus (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Staphylococcus aureus (1)
Sus scrofa domesticus (1)

Repository

pride (87)
iProX (62)
biostudies-arrayexpress (43)
MetaboLights (26)
EGA (6)
MassIVE (1)

Tissue

Cell culture (18)
Liver (13)
Brain (10)
Lung (6)
Epithelial cell (5)
Whole body (5)
Blood plasma (4)
Heart (4)
Permanent cell line cell (4)
Plant cell (4)
Testis (4)
Kidney (3)
Leaf (3)
Spleen (3)
Stem cell (3)
Adrenal adenoma cell (2)
Blood (2)
Blood serum (2)
Bone marrow (2)
Fibroblast (2)
Macrophage (2)
Blood cell (1)
Dendritic cell (1)
Electrically active cell (1)
Embryo (1)
Endosperm (1)
Erythrocyte (1)
Flower (1)
Hepatocyte (1)
Sertoli cell (1)

Disease

Disease free (7)
Breast cancer (3)
Brain cancer (2)
Wounds and Injuries (2)
Acute leukemia (1)
Adult hepatocellular carcinoma (1)
Alzheimer's disease (1)
Cerebrovascular disease (1)
Liver cancer (1)
Liver inflammation (1)
Lung cancer (1)
Lupus nephritis (1)
Plasmodium falciparum malaria (1)

Technology Type

Mass Spectrometry (87)
Shotgun proteomics (37)
Mass spectrometry (22)
Bottom-up proteomics (14)
Data-dependent acquisition (13)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-independent acquisition (7)
Gel-based experiment (7)
Mass spectrometry assay (3)
SWATH MS (3)
Top-down proteomics (3)
NMR spectroscopy (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
MSE (1)
Mass spectrometry imaging (1)
Olink affinity proteomics (1)
RNA mass spectrometry (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (14)
Liquid Chromatography MS - positive - reverse phase (11)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Gas Chromatography MS - positive (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
HiSeq X Ten (1)
Illumina HiSeq 4000 (1)
Q Exactive HF (1)
Quattro micro API (Waters) (1)
Ultra-High Performance Liquid Chromatography-Q Exactive Plus MS&MS/MS-Negative(UHPLC-MS&MS/MS(Negative))(Thermo Scientific) (1)
Ultra-High Performance Liquid Chromatography - Time Of Flight MS - Negative (UPLC-TOF MS(Negative)) (Waters) (1)
6530 Q-TOF LC/MS (Agilent) (1)
Agilent 5975E GC/MSD (Agilent) (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Q Exactive (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - (1)
API 4000 QTRAP (AB Sciex) (1)

Publication Date

2025 (37)
2022 (32)
2023 (27)
2024 (19)
2021 (17)
2026 (17)
2020 (11)
2013 (10)
2019 (10)
2014 (8)
2011 (7)
2010 (6)
2015 (5)
2018 (4)
2012 (2)
2009 (2)
2017 (2)
2016 (1)
2008 (1)

CHEBI ID

CHEBI:17368 (14)
CHEBI:16708 (11)
CHEBI:17568 (11)
CHEBI:16704 (11)
CHEBI:15354 (11)
CHEBI:30769 (11)
CHEBI:16449 (10)
CHEBI:17596 (10)
CHEBI:25094 (9)
CHEBI:16040 (9)
CHEBI:16750 (9)
CHEBI:17821 (9)
CHEBI:16393 (9)
CHEBI:15891 (9)
CHEBI:17895 (9)
CHEBI:25017 (8)
CHEBI:30832 (8)
CHEBI:15428 (8)
CHEBI:15741 (8)
CHEBI:6650 (8)
CHEBI:17154 (8)
CHEBI:16335 (8)
CHEBI:27266 (8)
CHEBI:15355 (8)
CHEBI:17750 (8)
CHEBI:18211 (8)
CHEBI:28834 (8)
CHEBI:16359 (8)
CHEBI:18012 (8)
CHEBI:32816 (8)

Metabolite Name

Hypoxanthine (10)
Uracil (7)
Choline (6)
Adenine (6)
Linoleic acid (5)
Uridine (5)
L-Tyrosine (5)
Pyruvic acid (4)
Valine (4)
L-Proline (4)
Dihydrothymine (4)
Palmitoleic acid (4)
L-Histidine (4)
Taurine (4)
Deoxycholic acid (4)
Dibutyl phthalate (4)
Guanine (4)
Riboflavin (4)
Isoleucine (4)
Creatine (4)
Inosine (4)
2-Piperidinone (3)
Palmitic amide (3)
3-Methyl-5-pentyl-2-furanundecanoic acid (3)
6,10,14-Trimethyl-5,9,13-pentadecatrien-2-one (3)
Pelargonic acid (3)
D-Fructose (3)
Linoleoyl ethanolamide (3)
4-hydroxyphenylpyruvate (3)
Leucine (3)

Study type

RNA-seq of coding RNA (17)
Transcription profiling by array (16)
ChIP-seq (3)
Other (2)
RNA-seq of non coding RNA (2)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Comparative genomic hybridization by array (1)

Release Date

2025 (1361)
2022 (1103)
2024 (1064)
2023 (1016)
2021 (800)
2020 (549)
2019 (412)
2018 (334)
2017 (268)
2016 (219)
2026 (203)
2015 (171)
2014 (131)
2013 (62)
2012 (49)
2011 (44)
2010 (26)
2009 (21)
2008 (11)
2007 (9)
2005 (4)
2006 (3)
2004 (1)

Lab affiliation

State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Sun Yat-sen University Cancer Center, Guangzhou 510060, China (3)
1. Department of Biochemistry and Molecular Cell Biology, State Key Laboratory of Oncogenes and Related Genes, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine. (2)
Cyrus Tang Medical Institute, Soochow University, Suzhou 215123, China. (2)
Human Phenome Institute,Zhangjiang FudanInternational Innovation Center, Fudan UniversityShanghai, 201203, China. (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
School of Life Sciences, Tsinghua University, China (2)
Shenzhen Hospital of Southern Medical University (2)
West China Second University Hospital, Sichuan University (2)
the First Affiliated Hospital of Chongqing Medical University (2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
1Academy of Orthopedics, Guangdong Province, Guangdong Provincial Key Laboratory of Bone and Joint Degeneration Diseases, The Third Affiliated Hospital of Southern Medical University, Guangzhou, China 2The Third School of Clinical Medicine, Southern Medical University, Guangzhou, China (1)
Anhui Province Key Laboratory of Medical Physics and Technology, Institute of Health and Medical Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China University of Science and Technology of China, Hefei, Anhui 230026, P. R. China Hefei Cancer Hospital, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China Precision Medicine Research Laboratory of Anhui Province, Hefei, Anhui 230088, P. R. China (1)
Associate Professor (1)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
Cancer Center of Union Hospital, Tongji Medical College,Huazhong University of Science and Technology (1)
Chinese Academy of Sciences (1)
College of Agronomy, Nanjing Agricultural University (1)
College of Food Science and Technology, Northwest University, China (1)
College of Life Sciences, Fujian Agriculture and Forestry University, (1)
College of Life Sciences, Shandong Normal University (1)
Cornell University (1)
Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany. (1)
Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China (1)
Department of Clinical Laboratory, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong 510120, China. (1)
Department of Hepatobiliary Surgery, the First Affiliated Hospital(Southwest Hospital) of Army Military Medical University, Chongqing 400038, China. (1)
Department of Obstetrics/Gynecology, Joint Laboratory of Reproductive Medicine (SCU-CUHK), Key Laboratory of Obstetric, Gynecologic and Pediatric Diseases and Birth Defects of Ministry of Education, West China Second University Hospital, Sichuan University, Chengdu 610041, China. (1)
Department of Plastic Surgery, Affiliated Friendship Plastic Surgery Hospital of Nanjing Medical University, Nanjing Medical University, Nanjing, China (1)
Department of Rehabilitation Medicine, Dapeng New District Nan’ao People’s Hospital, Rehabilitation Branch of the First Affiliated Hospital of Shenzhen University, Shenzhen, China. (1)
Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Department of biochemistry, Zhongshan school of medicine, Sun Yat-sen University,China (1)

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Gene expression profiles of MCF-7 cells treated with Si-Wu-Tang, estradiol and ferulic acid

Traditional Chinese medicines (TCM), usually composed of a mixture of components, may simultaneously target multiple genes/pathways and thus achieve superior efficacy for complex diseases such as cancer. To identify novel mechanisms of action and potential health benefits for a TCM formula Si-Wu-Tan...

ORGANISM(S): Homo sapiens

2011-05-18 | E-GEOD-23610 | biostudies-arrayexpress

Mechanisms research on Huangqin Tang interference with colitis associated colorectal cancer

Although the exact molecular mechanisms of colitis associated col orectal cancer are not fully understood, the chronic inflammation positively correlated with tumorigenesis. The Traditional Chinese Medicine botanical formulation Huangqin Tang has significant anti-inflammatory effects. We investigate...

ORGANISM(S): Mus Musculus

2022-02-16 | PXD031696 |

UPLC-MS/MS Determination of Twelve Ginsenosides in Shenfu Tang and Dushen Tang.

Not available

S-EPMC6662505 | biostudies-literature

Tracing pluripotency of human early embryos and embryonic stem cells by single cell RNA-seq

Find the casual relationship between gene expression network and cellular phenotype at single cell resolution. We collected donated human pre-implatation embryos, and the embryonic stem cells derived from them, isolate individual cells, prepared single cell cDNAs, and sequenced them by HiSeq2000. Th...

ORGANISM(S): Homo sapiens

2013-08-10 | E-GEOD-36552 | biostudies-arrayexpress

Improved prescription of taohechengqi-tang alleviates D-galactosamine acute liver failure in rats.

Not available

S-EPMC4768201 | biostudies-literature

Facilitation of MrgprD by TRP-A1 promotes neuropathic pain.

Not available

S-EPMC6988841 | biostudies-literature

Spatial Transcriptomic Analysis Using R-Based Computational Machine Learning Reveals the Genetic Profile of Yang or Yin Deficiency Syndrome in Chinese Medicine Theory.

Not available

S-EPMC8942619 | biostudies-literature

Small molecule inhibits respiratory syncytial virus entry and infection by blocking the interaction of the viral fusion protein with the cell membrane.

Not available

S-EPMC6404555 | biostudies-literature

Two new species of Helochares, with additional faunistic records from China (Coleoptera, Hydrophilidae, Acidocerinae).

Not available

S-EPMC8702532 | biostudies-literature

Genetic mapping and molecular mechanism behind color variation in the Asian vine snake

BACKGROUND: Reptiles exhibit a wide variety of skin colors, which serve essential roles in survival and reproduction. However, the molecular basis of these conspicuous colors remains unresolved.

RESULTS: We investigate color morph-enriched Asian vine snakes...

2023-02-23 | MTBLS6927 | MetaboLights

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