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MetabolomicsMulti-omics analysis of differential expression profiles in Vibrio natriegens strain VCOD-2 under optimal and high-salinity conditions

This study employs integrated multi-omics analysis to systematically investigate the proteome and metabolome of marine bacterium Vibrio natriegens strain VCOD-2 (ATCC 14048) under optimal salinity (3% NaCl) and high-salinity stress (8% NaCl) conditions, aiming to reveal the molecular me...

2026-03-18 | MTBLS14070 | MetaboLights
ProteomicsiTRAQ-based quantitative proteomic profiling of Natranaerobius thermophilus in response to salinity stress
Natranaerobius thermophilus is a unique extremophilic microorganism that exhibits remarkable adaptability and selectivity to the complex extreme environment characterized by high salt, high alkalinity, high temperature, and anaerobic conditions. However, the regulatory mechanisms of genes and protei...
ORGANISM(S): Natranaerobius Thermophilus Jw/nm-wn-lf 
2024-01-27 | PXD042033 |
ProteomicsMass spectrometry-based protein interactome and phosphoproteomics data upon NRDE2 overexpression
The HEK293T cells transiently expressing Flag-tagged empty vector or Flag-NRDE2-WT were lysed in NETN buffer (10 mM Tris-HCl [pH 8.0], 100 mM NaCl, 1 mM EDTA, and 0.5% NP-40) and immunoprecipitated with anti-Flag M2 agarose (M8823; Sigma-Aldrich, MO, USA). After washing four times with the high stri...
ORGANISM(S): Homo Sapiens 
2024-03-31 | PXD051117 |
ProteomicsThe role of ptpn21 in hematopoietic stem cells
To identify the downstream substrate/effector that mediates Ptpn21 function. We applied comprehensive phosphoproteomics analysis with Lin- cells isolated from Ptpn21-/- and Ptpn21+/+ mice. The analysis revealed many pTyr sites on molecules associated with cytoskeleton. Additionally, we present a lis...
ORGANISM(S): Mus Musculus 
PXD011381 |
ProteomicsNuclear polysaccharides maintain H3K9me3-heterochromatin and genomic stability
Polysaccharides are traditionally confined to the cell surface and extracellular space, whereas their nuclear roles remain unclear. Here, we show that N-glycans are present in the nucleus and modify inner nuclear membrane (INM) proteins across multiple cell types. Disruption of INM protein N-glycosy...
ORGANISM(S): Mus Musculus 
2025-12-30 | PXD072505 |
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