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ProteomicsComparative proteomics for identification of type I interferon response in primary human glioblastoma multiforme cells
Oncolytic virus therapy is a promising direction for cancer treatment. Numerous oncolytic virus strains are under development or examined in clinical trials, there are examples of FDA approved virus vaccines. Although evident progress exists, oncolytic viruses still suffer low efficiency and the mec...
ORGANISM(S): Homo sapiens (Human) 
2022-02-03 | PXD022906 | Pride
Glioblastoma Proteomics Interferone response Lc-ms/ms Oncolytic viruses 
ProteomicsComparative proteomics for identification of type I interferon response in primary human glioblastoma multiforme cells
Oncolytic virus therapy is a promising direction for cancer treatment. Numerous oncolytic virus strains are under development or examined in clinical trials, there are examples of FDA approved virus vaccines. Although evident progress exists, oncolytic viruses still suffer low efficiency and the mec...
ORGANISM(S): Homo sapiens (Human) 
2022-02-03 | PXD022836 | Pride
Glioblastoma Proteomics Interferone response Lc-ms/ms Oncolytic viruses 
ProteomicsIntegrated omics approaches to explore a new system of genetic control of dibenzothiophene desulfurization in Gordonia alkanivorans strain 135 -- MS1
This project aims to explore a new system for genetic control of dibenzothiophene desulfurization in Gordonia alkanivorans strain 135 using integrated omics approaches. A quantitative protomics, RNA-Seq analysis was performed. RNA-seq results were further validated using qRT-PCR for differentially e...
ORGANISM(S): Gordonia alkanivorans 
2025-05-07 | PXD058641 | Pride
Dibenzothiophene Ms1-only G. alkanivorans 135 Directms1 
ProteomicsM.musculus - Saliva, SC (Gundry,proteomics,2010)
abundance based on Spectral counting, Interaction consistency score: 11.1, Coverage: 7
ORGANISM(S): 10090 
2010-00-00 | 2383348395 | PAXDB
ProteomicsQuantitative assessment of microbiomes using ultra-fast MS/MS-free metaproteomics: model 1 and 3
This study presents an adaptation of the novel ultrafast MS1-based method called DirectMS1 to characterization of the single microorganisms and microbiomes. Using DirectMS1 we demonstrate the blind identification (with no prior knowledge of the bacterias in the sample) of a single bacterial species...
ORGANISM(S): Gordonia amicalis Gordonia alkanivorans Rhodococcus opacus Rhodococcus erythropolis Priestia aryabhattai 
2026-08-07 | PXD050587 | Pride
Metaproteomics Ms1-only Microbiomes Directms1 
TranscriptomicsThe metabolic and regulatory networks of carbohydrate utilization of Thermotoga maritima
In this study, we combined a subsystem-based comparative genomic approach with experimental validation to reconstruct the metabolic and regulatory networks of carbohydrate utilization in 11 complete genomes from the Thermotogales order. Exression profiling studies were performed using total RNA isol...
ORGANISM(S): Thermotoga maritima MSB8 
2013-08-02 | E-GEOD-47615 | biostudies-arrayexpress
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