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TranscriptomicsThe blood transcriptional signature of chronic HCV [Illumina data]
This study characterizes the effects of chronic Hepatitis C virus (HCV) infection on gene expression by analyzing blood samples from 10 treatment-naive HCV patients and 6 healthy volunteers. Differential expression analysis of microarray data from peripheral blood mononuclear cells (PBMCs) identifie...
ORGANISM(S): Homo sapiens 
2012-10-22 | E-GEOD-40223 | biostudies-arrayexpress
GenomicsTrans Chromosomal Methylation in Arabidopsis hybrids
The heterotic hybrid offspring of Arabidopsis accessions C24 and Landsberg erecta have altered methylomes. Changes occur most frequently at loci where parental methylation levels are different. There are context-specific biases in the non-additive methylation patterns with mCG generally increased ...
ORGANISM(S): Arabidopsis thaliana 
2012-02-05 | E-GEOD-35542 | biostudies-arrayexpress
ProteomicsMeasuring the hydrodynamic radii of peptides and proteins with an unmodified LC-ESI-MS instrument operating in a Taylor dispersion regime
Native ion mobility – mass spectrometry has been well established in recent years as a structural biology method. However, it is still useful to combine gas-phase techniques with complementary solution-phase measurements, for example hydrodynamic radius (Rh) determination. A common method to measure...
ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast) 
2025-07-10 | PXD062208 | Pride
Lc-ms Hydrodynamic radius Ccs Taylor dispersion 
ProteomicsMass spectrometry provides a highly sensitive non-invasive means of sequencing and tracking M-protein levels in blood of multiple myeloma patients
De nove sequencing of NISTmAb and of an M-protein from an multiple myeloma patient, MM2232
ORGANISM(S): Homo sapiens (Human) 
2021-07-16 | PXD022784 | Pride
Multiple myeloma M-protein 
MetabolomicsEcophysiological Study of Paraburkholderia sp. Strain 1N under Soil Solution Conditions: Dynamic Substrate Preferences and Characterization of Carbon Use Efficiency

We used time-resolved metabolic footprinting, an important technical approach used to monitor changes in extracellular compound concentrations during microbial growth, to study the order of substrate utilization (i.e., substrate preferences) and kinetics of a fast-growing soil isolate, Parabu...

2020-09-28 | MTBLS1692 | MetaboLights
MetabolomicsDynamic utilization of low-molecular-weight organic substrates across a microbial growth rate gradient

AIM: Low-molecular-weight organic substances (LMWOSs) are at the nexus between micro-organisms, plant roots, detritus and the soil mineral matrix. The nominal oxidation state of carbon (NOSC) has been suggested as a potential parameter for modelling microbial uptake rates of LMWO...

2023-08-14 | MTBLS3558 | MetaboLights
TranscriptomicsHeme-Bound Iron Activates Placenta Growth Factor via Erythroid KrM-CM-
We have tested the effect of iron on the gene expression profile in human leukemia cells with properties of erythroid differentiation. 12 Total samples were analyzed. We compared the gene expression profiles of cells treated with iron mesoporphyrin to mesoporphyrin alone. DMSO vehicle was also teste...
ORGANISM(S): Homo sapiens 
2014-09-08 | E-GEOD-52087 | biostudies-arrayexpress
TranscriptomicsGene expression profiling of C/EBPM-NM-2- and STAT3-deficient human endometrial stromal cells (HESC)
Our previous studies have shown that C/EBPM-NM-2 plays a critical role in human endometrial stromal decidualization. In order to identify the molecular pathways regulated by C/EBPM-NM-2 during decidualization, we performed gene expression profiling using RNA isolated from normal and C/EBPM-NM-2-defi...
ORGANISM(S): Homo sapiens 
2012-10-11 | E-GEOD-41473 | biostudies-arrayexpress
UnknownTransition to international classification of disease version 10, clinical modification: the impact on internal medicine and internal medicine subspecialties.
Not available
S-EPMC5935982 | biostudies-literature
TranscriptomicsRNA-seq of whole animal tissue and AWA olfactory neurons isolated by FACS from control and post-dauer L4 larval stage C. elegans
Developmental experiences play critical roles in shaping adult physiology and behavior. We and others previously showed that adult C. elegans which transiently experienced dauer arrest during development (PD: post-dauer) exhibit distinct gene expression profiles as compared to control adults which b...
ORGANISM(S): Caenorhabditis elegans 
2022-09-07 | E-MTAB-11823 | biostudies-arrayexpress
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