Teleost - OmicsDI

Show results for

Unknown (2222)
Genomics (391)
Transcriptomics (155)
Proteomics (33)
Metabolomics (5)
Models (3)
Methylation profiling (3)
Other (1)

Organisms

Danio rerio (50)
Oncorhynchus mykiss (12)
Fundulus heteroclitus (11)
Mus musculus (8)
Oryzias latipes (7)
Sparus aurata (6)
Salmo salar (6)
Pimephales promelas (4)
Carassius auratus (3)
Anguilla anguilla (3)
Lates calcarifer (3)
Ictalurus furcatus (3)
Gasterosteus aculeatus (3)
Ictalurus punctatus (3)
Oreochromis niloticus (3)
Salmo trutta (2)
Osmerus mordax (2)
Micropterus salmoides (2)
Nothobranchius furzeri (2)
Cyprinus carpio (2)
Scophthalmus maximus (2)
Homo sapiens (2)
Esox lucius (1)
Lemna minor (1)
Monopterus albus (1)
Hypophthalmichthys nobilis (1)
Cyclopterus lumpus (1)
Gadus morhua (1)
Didelphis marsupialis (1)
Sebastes melanops (1)

Organisms

Danio rerio (34)
Oncorhynchus mykiss (9)
Fundulus heteroclitus (7)
Mus musculus (7)
Oryzias latipes (6)
Oreochromis niloticus (5)
Carassius gibelio (4)
Ictalurus furcatus (3)
Acipenser schrenckii (3)
Hippoglossus hippoglossus (3)
Anguilla japonica (3)
Dicentrarchus labrax (3)
Paralichthys olivaceus (3)
Sparus aurata (3)
Salmo salar (3)
Cirrhinus cirrhosus (2)
Anguilla anguilla (2)
Sebastes melanops (2)
Eleutheronema tetradactylum (2)
Osteogaster aenea (2)
Pimephales promelas (2)
Poecilia reticulata (2)
Xenotoca eiseni (2)
Scophthalmus maximus (2)
Nothobranchius furzeri (2)
Lates calcarifer (2)
Astyanax mexicanus (2)
Actinopterygii (2)
Clarias macrocephalus (2)
Gasterosteus aculeatus (2)

Repository

ENA (384)
geo (119)
biostudies-arrayexpress (47)
pride (29)
MetaboLights (5)
BioModels (3)
iProX (2)
MassIVE (1)
PanoramaPublic (1)

Tissue

Egg (4)
Brain (3)
Intestinal juice (2)
Skin (2)
Seminal plasma (2)
Otolith organ (1)
Other source (1)
Peritoneal fluid (1)
Small intestine epithelium (1)
Oligodendrocyte (1)
Skeletal muscle fiber (1)
Bone (1)
Eye (1)
Muscle tissue (1)
Swim bladder (1)
Bladder organ (1)
Serum (1)
Parvalbumin alpha (1)
Intestinal epithelium (1)
Intestine (1)
Sperm (1)
Nerve cord (1)
Muscle (1)
Blood serum (1)
Heart (1)
Blood plasma (1)
Testis (1)
Liver (1)
Blood cell (1)
Cell culture (1)

Technology Type

Mass Spectrometry (29)
Shotgun proteomics (20)
Mass spectrometry (4)
HDMSE (3)
Bottom-up proteomics (3)
Data-independent acquisition (2)
Gel-based experiment (2)
Mass spectrometry assay (1)
MSE (1)
Data-dependent acquisition (1)

Instrument Platform

Illumina NovaSeq 6000 (4)
Dell PowerEdge R750; CPU: 2 × Intel Xeon Gold 6346 (32 Cores / 64 Threads); RAM: 188 GB (3)
Liquid Chromatography MS - positive - reverse phase (3)
See manuscript (2)
NucleoSpin RNA/Protein kit lysis buffer (350 µL per tube; Macherey‑Nagel). (2)
Illumina HiSeq 4000 (2)
FastPrep‑24 homogenizer (MP Biomedicals) (1)
FastPrep‑24 homogenizer (MP Biomedicals), operated at 5 m/s for 10 seconds. (1)
RapidPURE RNA Plant Kit (MP Biomedicals, Illkirch, France) (1)
FastPrep-24 homogeniser (1)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Q Exactive HF-X (1)
Flow injection analysis MS – alternating (1)
Liquid Chromatography MS - positive (1)
LTQ-Orbitrap (1)

Publication Date

2023 (29)
2026 (24)
2025 (16)
2016 (15)
2021 (13)
2024 (11)
2022 (10)
2010 (10)
2014 (9)
2013 (8)
2019 (8)
2020 (7)
2012 (7)
2018 (7)
2009 (6)
2008 (6)
2017 (6)
2015 (5)
2011 (5)
2007 (2)
2005 (1)

CHEBI ID

CHEBI:143745 (2)
CHEBI:195271 (2)
CHEBI:35038 (2)
CHEBI:34687 (2)
CHEBI:27997 (2)
CHEBI:73858 (2)
CHEBI:75342 (2)
CHEBI:16359 (2)
CHEBI:28865 (2)
CHEBI:64563 (2)
CHEBI:195269 (1)
CHEBI:75567 (1)
CHEBI:187409 (1)
CHEBI:132586 (1)
CHEBI:195270 (1)
CHEBI:195272 (1)
CHEBI:191103 (1)
CHEBI:183805 (1)
CHEBI:34686 (1)
CHEBI:181126 (1)
CHEBI:195264 (1)
CHEBI:25640 (1)
CHEBI:190340 (1)
CHEBI:63555 (1)
CHEBI:195263 (1)
CHEBI:182784 (1)
CHEBI:165384 (1)
CHEBI:182695 (1)
CHEBI:166468 (1)
CHEBI:190338 (1)

Metabolite Name

Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
Tris(2-butoxyethyl) phosphate (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
Monoolein (2)
Elaidic acid (2)
Cholic acid (2)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)
1-Hexadecanoyl-sn-glycerol (1)
9-Octadecenamide, (Z)- (1)
Ethanol, 2-(2-butoxyethoxy)- (1)
TG(62:9) (1)
TG(62:8) (1)
TG(60:13) (1)
TG(60:8) (1)
TG(60:6) (1)
TG(58:12) (1)
TG(56:10) (1)
TG(54:9) (1)
TG(50:6) (1)
PE(40:8) (1)
PC(P-38:6) (1)
PC(P-36:4) (1)
PC(44:6) (1)

IsPrivate

False (3)

First Public Date

2026 (51)
2023 (44)
2025 (43)
2024 (33)
2021 (32)
2014 (32)
2022 (31)
2019 (30)
2020 (29)
2018 (19)
2017 (12)
2015 (12)
2016 (9)
2013 (6)
2012 (1)

Modelling Approach

Metabolic network (3)

Modification

Not available (1)

Study type

Transcription profiling by array (34)
RNA-seq of coding RNA (9)
Animal - High-throughput sequencing (1)
ChIP-seq (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (242)
2023 (172)
2021 (163)
2020 (162)
2019 (159)
2016 (134)
2018 (131)
2017 (129)
2025 (116)
2024 (116)
2014 (98)
2012 (98)
2015 (97)
2013 (85)
2009 (63)
2010 (61)
2011 (60)
2008 (53)
2007 (37)
2026 (25)
2006 (21)
2005 (13)
2001 (8)
2004 (7)
1997 (7)
2003 (5)
2002 (3)
2000 (3)
1998 (1)

Lab affiliation

Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Lucknow, Uttar Pradesh 226002, India (5)
Marine Biology and Ecology Department, Rosenstiel School of Marine and Atmospheric Science, University of Miami (2)
School of Biological Sciences University of Aberdeen United Kingdom (1)
Professor, Department of Integrative Biology, College of Biological Sciences, University of Guelph (1)
University of California, Los Angeles, USA (1)
University of Otago. Department of Zoology. (1)
Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, 430079, China (1)
Professor in Parasitology at Aberystwyth University (1)
1 Institute of Marine Sciences, Spanish National Research Council (CSIC), 08003 Barcelona, Spain 2 Institute of Biotechnology and Biomedicine (IBB), Universitat Autònoma de Barcelona, 08193 Bellaterra (Cerdanyola del Vallès), Spain (1)
Laboratory of Biochemistry and Molecular Biology, School of Marine Sciences, Ningbo University, Ningbo, Zhejiang 315211, China (1)
Department of Marine Biology and Ecology, Rosenstiel School of Marine and Atmospheric Science, University of Miami, Miami, FL, USA (1)
MacCoss Lab University of Washington Department of Genome Sciences Seattle, WA USA (1)
University of Washington Department of Genome Sciences Seattle, WA, USA (1)
Chemistry and Biochemistry, University of Windsor, Canada (1)
University of Sheffield (1)
Proteomics Group Max-Planck-Institute of Experimental Medicine Hermann-Rein-Str. 3 37075 Goettingen, Germany (1)
Agricultural Center Baden-Württemberg, Fisheries Research Station, Germany (1)
Research Group of Physiology and Genetics of Hydrobionts, Institute of Systematics and Ecology of Animals of Siberian Branch of Russian Academy of Sciences, Russia (1)
Gamete and Embryo Biology Department, Institute of Animal Reproduction and Food Research, Polish Academy of Sciences in Olsztyn (1)
Biology (1)
Northeastern University (1)
Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway (1)
Helmholtz-Centre for Environmental Research - UFZ, Department of Molecular Systems Biology, Leipzig, Germany (1)
Ocean University of China (1)

2813 Results

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