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Unknown (16164)
Proteomics (4444)
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Organisms

Homo sapiens (393)
Mus musculus (309)
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Arabidopsis thaliana (45)
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Saccharomyces cerevisiae BY4741 (2)
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Escherichia coli BW38028 (1)
Blastomyces dermatitidis ATCC 26199 (1)
Influenza A virus (A/WSN/1933(H1N1)) (1)
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Organisms

Homo sapiens (238)
Mus musculus (191)
Saccharomyces cerevisiae (31)
Drosophila melanogaster (28)
Arabidopsis thaliana (21)
Caenorhabditis elegans (8)
Escherichia coli str. K-12 substr. MG1655 (7)
Schizosaccharomyces pombe (7)
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Tetrahymena thermophila (3)
Gallus gallus (3)
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Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 (2)
Human immunodeficiency virus 1 (2)
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Escherichia coli K-12 (2)
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synthetic construct (2)
Saccharomyces cerevisiae BY4741 (2)
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Bifidobacterium longum NCC2705 (1)
Escherichia coli MG1657 (1)
Rickettsia typhi (1)
Campylobacter jejuni subsp. jejuni CG8421 (1)
Tomato yellow leaf curl China virus (1)

Repository

pride (4037)
ENA (801)
geo (512)
biostudies-arrayexpress (402)
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jPOST (88)
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Technology Type

Mass Spectrometry (4037)
Shotgun proteomics (2200)
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Data-dependent acquisition (532)
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Gel-based experiment (215)
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ILLUMINA, Illumina HiSeq 2500 (1)
RNA mass spectrometry (1)

Instrument Platform

Orbitrap Fusion Lumos (35)
Orbitrap Fusion (32)
Orbitrap Exploris 480 (26)
Q Exactive (23)
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Axon GenePix 4000A scanning hardware (1)
Affymetrix GeneChip Scanner 3000 7G (1)
The Agilent scanner G2565BA (1)
NanoDrop ND-1000 Spectrophotometer (NanoDrop Technologies) (1)
GenePix Professional 4200A [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
MinION (1)
Illumina MiSeq (1)
Synapt G2 MS (1)

Publication Date

2025 (793)
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2019 (291)
2018 (209)
2016 (166)
2017 (145)
2015 (129)
2013 (83)
2014 (80)
2010 (71)
2012 (58)
2011 (47)
2008 (24)
2009 (19)
2007 (17)
2005 (10)
2006 (5)
2002 (1)

UNIPROT ID/AC

246196.MSMEI_0054 (2)
246196.MSMEI_0075 (2)
246196.MSMEI_0389 (2)
246196.MSMEI_0784 (2)
246196.MSMEI_0974 (2)
246196.MSMEI_1000 (2)
246196.MSMEI_1011 (2)
246196.MSMEI_1026 (2)
246196.MSMEI_1198 (2)
246196.MSMEI_1222 (2)
246196.MSMEI_1367 (2)
246196.MSMEI_1680 (2)
246196.MSMEI_1690 (2)
246196.MSMEI_1744 (2)
246196.MSMEI_1958 (2)
246196.MSMEI_2108 (2)
246196.MSMEI_2225 (2)
246196.MSMEI_2227 (2)
246196.MSMEI_2228 (2)
246196.MSMEI_2231 (2)
246196.MSMEI_2232 (2)
246196.MSMEI_2233 (2)
246196.MSMEI_2235 (2)
246196.MSMEI_2236 (2)
246196.MSMEI_2237 (2)
246196.MSMEI_2238 (2)
246196.MSMEI_2239 (2)
246196.MSMEI_2241 (2)
246196.MSMEI_2244 (2)
P01258 (1)

CHEBI ID

CHEBI:17750 (4)
CHEBI:16856 (3)
CHEBI:65302 (2)
CHEBI:64516 (2)
CHEBI:66848 (2)
CHEBI:17924 (2)
CHEBI:42111 (2)
CHEBI:17549 (2)
CHEBI:141588 (2)
CHEBI:17533 (2)
CHEBI:17724 (2)
CHEBI:15891 (2)
CHEBI:27997 (2)
CHEBI:18183 (2)
CHEBI:28875 (2)
CHEBI:37024 (2)
CHEBI:18237 (2)
CHEBI:24266 (2)
CHEBI:28867 (2)
CHEBI:17311 (2)
CHEBI:16668 (2)
CHEBI:16865 (2)
CHEBI:7676 (2)
CHEBI:17929 (2)
CHEBI:16113 (2)
CHEBI:15741 (2)
CHEBI:7916 (2)
CHEBI:44215 (2)
CHEBI:16919 (2)
CHEBI:16347 (2)

Metabolite Name

Beta-Nicotinamide adenine dinucleotide (2)
D-Sorbitol (2)
MTA (1)
Alpha ketoglutarate (1)
5-methyltetrahydrofolate (1)
SAM (1)
PC 40:6|PC 18:1_22:5 (1)
PC 38:4|PC 18:1_20:3 (1)
PC 33:1|PC 17:0_16:1 (1)
PC 31:1|PC 15:0_16:1 (1)
PC 31:0|PC 14:0_17:0 (1)
PC 29:0|PC 14:0_15:0 (1)
LPI 16:0 (1)
SAH (1)
PC 32:2|PC 16:1_16:1 (1)
PC36:2_14 (1)
PC36:2 (1)
PC34:1_14 (1)
PC34:1 (1)
PC34:2_25 (1)
PC34:2_23 (1)
PC34:2_16 (1)
PC34:2_14 (1)
PC34:2_9 (1)
PC34:2 (1)
PC32:1_25 (1)
PC32:1_23 (1)
PC32:1_16 (1)
PC32:1_14 (1)
PC32:1_9 (1)

First Public Date

2025 (103)
2023 (82)
2024 (77)
2026 (72)
2020 (67)
2014 (65)
2013 (60)
2021 (56)
2022 (50)
2017 (46)
2019 (35)
2015 (31)
2018 (28)
2016 (28)
2012 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (50)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (22)
Functional Proteomics, ICR (20)
European Molecular Biology Laboratory (18)
TIGEM (14)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany Frankfurt Cancer Institute, Frankfurt am Main, Germany Cardio-Pulmonary Institute, Frankfurt am Main, Germany (12)
Professor of Genomic Evolution, School of Medicine, Conway Institute of Biomolecular and Biomedical Research, University College Dublin Belfield Dublin 4 (11)
The Institute of Cancer Research (11)
The University of Melbourne (11)
Whitehead Institute for Biomedical Research and Massachusetts Institute of Technology (11)
University of Edinburgh (10)
Centre for Proteome Research, University of Liverpool, Liverpool, UK (9)
College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
Medical University of Vienna (9)
North Carolina State University (9)
The University of Sydney (9)
Brigham and Women's Hospital, Harvard Medical School (8)
ETH Zurich, Institute of Molecular Systems Biology, Zurich, Switzerland (7)
The Institute of Cancer Research, London (7)
Baylor College of Medicine (6)
Core Facility for Mass Spectrometry and Proteomics, Center for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance, 69120 Heidelberg, Germany (6)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (6)
Department of Biochemistry and Molecular Biology, University of Calgary, Alberta, Canada; Department of Physiology and Pharmacology, University of Calgary, Alberta, Canada; The Hotchkiss Brain Institute, University of Calgary, Alberta, Canada; McCaig Institute for Bone and Joint Health, University of Calgary, Alberta, Canada (6)
Department of Oncology-Pathology, Karolinska Institutet, 171 77 Stockholm, Sweden Institute of Molecular and Cell Biology, A*STAR, Singapore 138673, Singapore (6)
Institute for Systems Biology (6)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore 575018, India (6)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (6)
University of Missouri (6)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (5)
Cellzome, a GSK company (5)

IsPrivate

False (2)

Classification

viruses (31)
bacteria (29)
fungi (7)
protozoa (6)

Modification

15.994915 (12)
42.010565 (12)
-17.026549 (9)
N6 (9)
57.021464 (8)
+3amu) (6)
N6-dimethyl-L-lysine (6)
2x(15)N labeled L-lysine (5)
4-tetrahydrothiazine-3-carboxylic acid (5)
45.029395 (5)
4x(15)N labeled L-arginine (4)
4x(2)H labeled dimethylated residue (4)
6.020129 (4)
10.008269 (3)
4x(2)H labeled dimethylated L-lysine (3)
56.026215 (2)
-18.010565 (1)
0.984016 (1)
15.99491 (1)
1x(15)N labeled L-valine (1)
26.01565 (1)
3-dipalmitoyl-glycerol)cysteine (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
47.984744 (1)
57.02146 (1)
58.005479 (1)
59.036279 (1)
6x(2)H labeled dimethylated L-arginine (1)
788.725776 (1)
Not available (1)

Study type

Transcription profiling by array (157)
RNA-seq of coding RNA (72)
ChIP-seq (61)
RNA-seq of non coding RNA (40)
ChIP-chip by tiling array (15)
Other (10)
ChIP-chip by array (9)
Comparative genomic hybridization by array (6)
Unknown experiment type (5)
Transcription profiling by tiling array (3)
Methylation profiling by high throughput sequencing (3)
RIP-chip by array (2)
RNAi profiling by array (2)
CLIP-seq (2)
MicroRNA profiling by array (2)
DNA-seq (2)
Proteomic profiling by array (2)
RNA-seq of total RNA (2)
High-throughput sequencing (1)
Genotyping by array (1)
Antigen profiling (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
Ribo-seq (1)
Methylation profiling by array (1)

Release Date

2021 (986)
2023 (948)
2020 (939)
2022 (938)
2015 (860)
2016 (846)
2017 (837)
2019 (835)
2018 (828)
2014 (807)
2024 (792)
2012 (762)
2011 (760)
2025 (757)
2013 (750)
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2009 (558)
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2005 (275)
2004 (218)
2003 (167)
1999 (143)
2001 (141)
2002 (138)
2000 (137)
1998 (107)
2026 (79)
1997 (44)

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The GNMT N-terminus Couples Folate Feedback to Methyl-donor Homeostasis

Maintenance of S-adenosylmethionine (SAM) homeostasis is essential for methylation of biomolecules, nucleotide and polyamine synthesis, and redox balance. While all methyltransferases consume SAM, only a subset of highly tissue specific methyltransferases regulates methylation potential. Among them,...

2026-08-18 | MTBLS15161 | MetaboLights

DUX4 recruits p300/CBP through its C-terminus and induces global H3K27 acetylation changes

Ectopic expression of the double homeodomain transcription factor DUX4 causes facioscapulohumeral muscular dystrophy (FSHD). Mechanisms of action of DUX4 are currently unknown. Using immortalized human myoblasts with a titratable DUX4 transgene, we identify by mass spectrometry an interaction betwee...

ORGANISM(S): Homo sapiens

2016-03-10 | E-GEOD-78158 | biostudies-arrayexpress

Whole brain transcriptome analysis of PTEN C-terminus mutant mice

PRJNA488572 | ENA

Signaling suppressive determinants of the FGFR2 C-terminus

PRJEB60417 | ENA

Terminus DNA loss in the Escherichia coli

PRJEB23279 | ENA

XerD is required to unload bacterial SMC complexes at the replication terminus

PRJNA604765 | ENA

Identifying the N-terminus of SLX4Nter in HeLa KO30 cells

The project was aimed at identifying the N-terminus of a truncated form of SLX4 (termed SLX4Nter) in HeLa KO30 cells. The HeLa KO30 cell line comes from a clone of HeLa Flp-In T-Rex cells (termed FITo) obtained through a CRISPR-Cas9 approach using commercially available plasmids from Santa Cruz Biot...

ORGANISM(S): Homo sapiens (Human)

2022-02-16 | PXD029062 | Pride

Terminus DNA loss in the Escherichia coli

Study of the mechanisms of RecB mutant terminus DNA loss in Escherichia coli. FX158: WT MG1655 FX35: recB- FX37: ruvAB- FX51: matP- MIC18: recB- sbcD- sbcC- MIC20: recB- ruvAB- MIC24: matP- recB- MIC25: recA- recB- MIC31: sbcB- sbcD- MIC34: recA- recD- MIC40: linear chromosome MIC41: linear chromos...

ORGANISM(S): Escherichia coli str. K-12 substr. MG1655

2017-11-10 | E-MTAB-6122 | biostudies-arrayexpress

Whole brain transcriptome analysis of PTEN C-terminus mutant mice

PTEN contains a C-terminal motif that binds to various PDZ domain-containing proteins including PSD-95. The PTEN C-terminus is known to mediate synaptic translocation of PTEN during long-term depression (LTD) and amyloid-b-induced synaptic depression. However, it remains unknown whether it regulates...

ORGANISM(S): Mus musculus

2020-12-17 | GSE119236 | GEO

DNA Repair Function Scores for 2172 Variants in the BRCA1 Amino-Terminus

PRJNA981519 | ENA

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22348 Results

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