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TranscriptomicsCervical cancer
This SuperSeries is composed of the following subset Series: GSE30758: Epigenome analysis of normal cells from the uterine cervix in a nested prospective case control study within the ARTISTIC trial GSE30759: Epigenome analysis of normal and cancer tissue from the uterine cervix Refer to individual ...
ORGANISM(S): Homo sapiens 
2012-02-20 | E-GEOD-30760 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of breast tissue from women with and without breast cancer.
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in breast tissues from women with and without breast cancer. Breast tissue samples were drawn from 114 breast cancers and 23 non-neoplastic breast tissues. The b...
ORGANISM(S): Homo sapiens 
2012-02-20 | E-GEOD-32393 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of white blood cells from healthy women with and without BRCA1 mutation.
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in white blood cells from women with and without BRCA1 mutation. Whole blood samples were drawn from 30 BRCA1 mutation carriers (15 women with breast cancer and ...
ORGANISM(S): Homo sapiens 
2012-02-20 | E-GEOD-32396 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of normal cells from the uterine cervix in a nested prospective case control study within the ARTISTIC trial
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in normal cells from the uterine cervix (liquid based cytology samples), obtained from 152 women in a nested prospective case-control study within the ARTISTIC t...
ORGANISM(S): Homo sapiens 
2012-02-23 | E-GEOD-30758 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of normal and cancer tissue from the uterine cervix
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in normal and cancer tissue from the uterine cervix. There are a total of 63 samples, 15 samples of normal histology and 48 cervical cancers. The normal cervical...
ORGANISM(S): Homo sapiens 
2012-02-23 | E-GEOD-30759 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of endometrium tissue from women with metastatic endometrial cancer.
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in endometrium tissues from women with metastatic endometrial cancer. Endometrium tissue samples were drawn from 18 metastatic endometrial cancers. The metastati...
ORGANISM(S): Homo sapiens 
2012-02-20 | E-GEOD-33422 | biostudies-arrayexpress
TranscriptomicsHigh resolution array-CGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer
An oligo array based high-resolution analysis of copy number alterations in 171 primary breast tumors of relatively small size and low NPI, and 49 breast cancer cell-lines. Objectives of the study were to study the molecular taxonomy and the genomic aberration patterns in a breast cancer cohort repr...
ORGANISM(S): Homo sapiens 
2007-08-16 | E-GEOD-8757 | biostudies-arrayexpress
GenomicsComparative methylome analysis of benign and malignant peripheral nerve sheath tumors
Aberrant DNA methylation (DNAm) was first linked to cancer over 25 years ago. Since then, many studies have associated hypermethylation of tumour suppressor genes and hypomethylation of oncogenes to the tumourigenic process. However, most of these studies have been limited to the analysis of promote...
ORGANISM(S): Homo sapiens 
2011-01-01 | E-GEOD-21714 | biostudies-arrayexpress
GenomicsMethylome Analysis of FF HPV+ and HPV- HNSCC samples
The analysis of the 6 methylomes by MeDIP-Seq comprise 3 HPV+ HNSCC samples and 3 HPV- HNSCC samples Analysis of the 6 methylomes, comprising 3 HPV+ HNSCC samples and 3 HPV- HNSCC samples
ORGANISM(S): Homo sapiens 
2012-11-01 | E-GEOD-38263 | biostudies-arrayexpress
GenomicsWP8_DNA_Methylation_450K_UCL
BLUEPRINT DNA methylation profiles of monocytes, T cells and B cells in type 1 diabetes-discordant monozygotic twins
EGAD00010001025 | EGA
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