Ti-4 - OmicsDI

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Unknown (686)
Proteomics (227)
Transcriptomics (82)
Genomics (48)
Metabolomics (9)
Methylation profiling (1)
Other (1)

Organisms

Schizosaccharomyces pombe (181)
Sus scrofa domesticus (181)
Saccharomyces cerevisiae (181)
Staphylococcus aureus (181)
Rattus norvegicus (181)
Escherichia coli (181)
Homo sapiens (181)
Shigella flexneri (181)
Allexis (181)
Shigella (181)
Listeria monocytogenes (181)
Entamoeba histolytica HM-1:IMSS-A (181)
Solanum tuberosum (181)
Homo sapiens (79)
Mus musculus (32)
Drosophila melanogaster (4)
Arabidopsis thaliana (3)
Bos taurus (3)
Rhodospirillum rubrum (2)
Rattus norvegicus (2)
Pinus contorta (1)
Coxiella burnetii (1)
Human alphaherpesvirus 1 (1)
Haloferax volcanii (1)
Cyprinus carpio (1)
Anopheles gambiae (1)
Saccharomyces cerevisiae S288C (1)
Escherichia coli K-12 (1)
Saccharomyces cerevisiae (1)
Escherichia coli str. K-12 substr. MG1655 (1)

Organisms

Mus musculus (13)
Homo sapiens (10)
Arabidopsis thaliana (3)
Haloferax volcanii DS2 (1)
Agrobacterium fabrum (1)
biocrust metagenome (1)
Bos taurus (1)

Repository

pride (181)
biostudies-arrayexpress (81)
ENA (36)
PeptideAtlas (34)
geo (9)
MetaboLights (9)
MassIVE (6)
EGA (5)
iProX (3)
jPOST (3)
GPMDB (1)

Tissue

Cell culture (39)
Others (33)
Plant cell (13)
Blood (12)
Epithelial cell (10)
Leaf (10)
T cell (9)
Permanent cell line cell (8)
Macrophage (8)
Root (7)
Blood cell (6)
Brain (6)
Photosynthetic cell (5)
Skeletal muscle (5)
Testis (4)
Hepatocyte (4)
B cell (3)
Cell suspension culture (3)
Kidney (3)
Whole body (3)
Liver (3)
Prokaryotic cell (2)
Cotyledon (2)
Neutrophil (2)
Shoot (2)
Rosette (2)
Epithelial cell of cervix (2)
Milk (2)
Primary cell (2)
Lung (1)

Disease

Disease free (12)
Chagas disease (6)
Acute leukemia (5)
Brain glioblastoma multiforme (3)
Malignant neoplasm of ovary (3)
Breast cancer (3)
Acute stress disorder (2)
Plasmodium falciparum malaria (2)
Brain cancer (2)
Colon cancer (2)
Human immunodeficiency virus infectious disease (2)
Healthy (1)
Not Available (1)
Non-small Cell Lung Carcinoma (1)
Myelodysplastic syndrome (1)
Breast adenocarcinoma (1)
Gonorrhea (1)
Meningitis (1)
Mastitis (1)
Mitochondrial metabolism disease (1)
Malaria (1)
Lymphoma (1)
Kidney cancer (1)
COVID-19 (1)
Cancer (1)
Cervix carcinoma (1)
Glioblastoma (1)
Lung cancer (1)
Influenza (1)

Technology Type

Mass Spectrometry (181)
Shotgun proteomics (106)
Bottom-up proteomics (36)
Data-dependent acquisition (20)
Data-independent acquisition (12)
SWATH MS (9)
Affinity purification coupled with mass spectrometry proteomics (8)
Mass spectrometry (7)
Gel-based experiment (6)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
DiaPASEF (4)
All-ion fragmentation (4)
Top-down proteomics (4)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Metaproteomics (1)
RNA mass spectrometry (1)

Instrument Platform

LTQ Orbitrap Elite (16)
Illumina HiSeq 2500 (7)
Illumina NovaSeq 6000 (4)
Illumina HiSeq 2000 (4)
Illumina HiSeq 4000 (4)
Illumina Genome Analyzer IIx (3)
N/A (2)
Orbitrap Exploris 480 (2)
GeneTitan MultiChannel System (1)
GeneChip Clariom S mouse array cartridge and Affymetrix GeneTitan MultiChannel System (1)
GeneChip Pico Kit (Affymetrix/ThermoFisher) (1)
ReliaPrep RNA Miniprep System (Promega) (1)
Adipocyte Progenitor Isolation Kit (Miltenyi Biotec) (1)
Illumina NextSeq2000 (2x100bp) (1)
3’ 10X Genomics Chromium (1)
Nikon Eclipse Ti2 with brightfield and fluorescence capacity (TRITC) (1)
Leica Biosystems Cryostat (1)
Bio-Rad CFX96 Real-time System (1)
Cutadapt, STAR (1)
TruSeq Stranded mRNA Sample Prep Kit (Illumina) (1)
BD InFlux Cytometer (Becton-Dickinson) (1)
Unspecified (1)
Other (1)
GenePix 4000A [Axon Instruments] (1)
Scanning hardware (1)
NextSeq 2000 (1)
HiSeq X Ten (1)
Illumina MiSeq (1)
Instrument (1)
Q-Exactive HF (ThermoScientific) (1)

Publication Date

2025 (40)
2022 (33)
2024 (31)
2026 (30)
2015 (25)
2023 (24)
2013 (24)
2021 (21)
2014 (19)
2019 (17)
2020 (14)
2016 (10)
2018 (9)
2012 (6)
2010 (5)
2017 (3)
2011 (3)
2009 (3)
2008 (3)
2007 (3)
2006 (1)

UNIPROT ID/AC

Q9Y2W1 (34)
Q9UQ35 (34)
Q9NYF8-3 (33)
Q9NYF8 (33)
P08238 (33)
Q8IYB3 (32)
Q58FF7 (32)
Q9NYF8-4 (32)
P63261 (32)
P60709 (32)
P11388 (32)
P07900 (32)
P06748-3 (32)
P06748-2 (32)
P06748 (32)
I3L4N8 (32)
B4E3A4 (32)
A5A3E0 (32)
Q13428 (31)
Q58FF8 (31)
Q9BW71 (31)
Q13523 (31)
P27824 (31)
P27816 (31)
E7EVA0 (31)
Q9H1E3 (30)
Q96JM3 (30)
P06733 (30)
Q15154 (30)
Q14568 (30)

ENSEMBL ID

ENSG00000147251 (11)
ENSG00000170477 (7)
ENSG00000204131 (2)

CHEBI ID

CHEBI:16449 (3)
CHEBI:22660 (3)
CHEBI:25017 (3)
CHEBI:17822 (3)
CHEBI:48430 (3)
CHEBI:32816 (3)
CHEBI:17202 (3)
CHEBI:28867 (3)
CHEBI:15428 (3)
CHEBI:16737 (3)
CHEBI:15741 (3)
CHEBI:16695 (3)
CHEBI:18257 (3)
CHEBI:18211 (3)
CHEBI:18133 (2)
CHEBI:15682 (2)
CHEBI:78320 (2)
CHEBI:27266 (2)
CHEBI:35932 (2)
CHEBI:24898 (2)
CHEBI:26271 (2)
CHEBI:27570 (2)
CHEBI:28300 (2)
CHEBI:25094 (2)
CHEBI:22653 (2)
CHEBI:26986 (2)
CHEBI:18186 (2)
CHEBI:28044 (2)
CHEBI:18237 (2)
CHEBI:29016 (2)

Metabolite Name

Creatinine (3)
L-Carnitine (3)
Creatine (3)
D-erythro-Sphingosine C-17 (2)
Butyl salicylate (2)
Trolamine (2)
Glucosamine (2)
1-Kestose (2)
Niacinamide (2)
Dodecanoylcarnitine (2)
Spermidine (2)
Serotonin (2)
IMP (2)
Histamine (2)
Uracil (2)
L-Histidine (2)
(5alpha,8beta,9beta)-5,9-Epoxy-3,6-megastigmadien-8-ol (2)
Spermine (2)
Farnesyl acetone (2)
Oleic acid (2)
L-Isoleucine (2)
Cytosine (2)
13Z-Docosenamide (2)
LysoPE(18:0/0:0) (2)
L-Valine (2)
Guanine (2)
Dehydrocurdione (2)
L-Proline (2)
Sphinganine (2)
PE(16:0/0:0) (2)

First Public Date

2025 (9)
2023 (7)
2014 (6)
2026 (2)
2024 (2)
2022 (2)
2021 (2)
2018 (2)
2020 (1)
2019 (1)
2017 (1)
2015 (1)

Modification

Not available (1)

Study type

Transcription profiling by array (38)
RNA-seq of coding RNA (11)
RNA-seq of coding RNA from single cells (6)
ChIP-seq (5)
Methylation profiling by array (3)
Ribo-seq (2)
Other (2)
FAIRE-seq (1)
MNase-seq (1)
ChIP-chip by tiling array (1)
Human - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
Spatial transcriptomics by high-throughput sequencing (1)
Comparative genomic hybridization by array (1)
DNA-seq (1)
CUT&RUN (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2022 (90)
2023 (88)
2025 (81)
2024 (70)
2021 (61)
2020 (60)
2018 (45)
2019 (36)
2017 (32)
2015 (32)
2014 (31)
2016 (24)
2026 (20)
2013 (16)
2011 (16)
2012 (15)
2010 (14)
2009 (11)
2008 (9)
2007 (6)
2006 (6)
2004 (2)
2003 (1)
1999 (1)

Lab affiliation

Instituto de Biotecnología, Grupo de Bioquímica y Parasitología Molecular, Departamento de Parasitología, Universidad de Granada, Granada, Spain. (6)
EDyP (3)
Wageningen University (3)
Department of Pharmacology, School of Basic Medical Sciences, Tianjin Medical University (2)
Centro de Investigación Príncipe Felipe, Av. Eduardo Primo Yúfera 3, 46012 Valencia, Spain (2)
State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, China (2)
Paul Scherrer Institute, Center for Radiopharmaceutica Sciences, 5232 Villigen PSI, Switzerland (2)
VIB-UGent Center for Plant Systems Biology (2)
lab (2)
State Key Laboratory of Reproductive Medicine and Offspring Health, Department of Histology and Embryology, Gusu School, Nanjing Medical University (2)
Division of Cell Signalling and Immunology, School of Life Sciences, University of Dundee, Dundee, UK (2)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (2)
University of Copenhagen Faculty of Health and Medical Sciences Novo Nordisk Foundation Center for Protein Research Proteomics Program (2)
University of Edinburgh (2)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (2)
Zhongshan School of Medicine Sun Yat-sen University, Guangzhou, China (1)
Center for Tumor Biology and Immunology (ZTI), Philipps University, Hans-Meerwein-Strasse 3, 35043 Marburg, Germany (1)
Department of Medical Biochemistry, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University. (1)
Center for Tuberculosis Control of Guangdong Province (1)
Institute of Molecular Health Sciences, Department of Biology, Swiss Federal Institute of Technology ETH, Zurich (1)
Wellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh (1)
1. Department of Paediatrics, University Hospital of North Norway, Tromsø, Norway 2 Paediatric Research Group, Department of Clinical Medicine, Faculty of Health Sciences, UiT- The Arctic University of Norway, Tromsø, Norway. (1)
Univ. Grenoble Alpes, INRA, CNRS, CEA, BIG-LPCV, 38000 Grenoble, France (1)
Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany (1)
Institute of Molecular Systems Biology D-BIOL ETH Zurich Switzerland (1)
Max Planck Institute for Multidisciplinary Sciences, Bioanalytical Mass Spectrometry Group, Am Fassberg 11, 37077 Göttingen, Germany University Medical Center Goettingen, Institute for Clinical Chemistry, Bioanalytics, Robert-Koch-Strasse 40, 37075 Göttingen, Germany (1)
Department of Biochemistry and Molecular Biology, Faculty of Medicine, Life Sciences Institute, University of British Columbia, Canada, V6T 1Z3. (1)
Drug Delivery, Disposition and Dynamics, Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, Australia (1)
Department for Neurodegenerative Science Van Andel Institute Grand Rapids, MI (1)
College of Veterinary Medicine, Gansu Agricultural University (1)

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Identification of TI-4-interacting proteins

Transcriptional co-activator with PDZ-binding motif (TAZ) (the official gene name; WWTR1) interacts with transcription factors in the nucleus but when phosphorylated, translocates to the cytoplasm and undergoes degradation. Chemical compounds that modulate the subcellular localization of TAZ are sup...

ORGANISM(S): Homo sapiens (Human)

2021-09-10 | PXD024194 | Pride