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UnknownGlobal quantitative proteomic analysis profiles of host protein expression in response to enterovirus A71 infection in bronchial epithelial cells based on tandem mass tag (TMT) peptide labeling coupled with LC-MS/MS uncovers the key role of proteasome in virus replication.
Not available
S-EPMC10194169 | biostudies-literature
UnknownComparative Proteome Profiling of Saliva Between Estrus and Non-Estrus Stages by Employing Label-Free Quantitation (LFQ) and Tandem Mass Tag (TMT)-LC-MS/MS Analysis: An Approach for Estrus Biomarker Identification in Bubalus bubalis.
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S-EPMC9217162 | biostudies-literature
TranscriptomicsMultiomics analysis of canine myocardium after circumferential pulmonary vein ablation: Effect of NPY on long-term reinduction of atrial fibrillation
In this study,We established a long-term model of beagle canines after circumferential pulmonary vein ablation (CPVA). The transcriptome and proteome were obtained using high-throughput sequencing and TMT-tagged LC‒MS/LC analysis. Differentially expressed genes and proteins were screened and enriche...
ORGANISM(S): Canis lupus familiaris 
2024-08-14 | GSE248285 | GEO
ProteomicsEimeria necatrix Wall-Forming Bodies and Oocyst Wall Proteomic Analysis by Tandem Mass Tag (TMT) Labeling and Liquid Chromatography Tandem-Mass Spectrometry (LC-MS/MS) Techniques
WFBs and the oocyst wall of Eimeria necatrix were subjected to comparative proteomic analysis using tandem mass tag (TMT) in conjunction with liquid chromatography tandem-mass spectrometry (LC-MS/MS) techniques
ORGANISM(S): Eimeria necatrix 
2024-01-26 | PXD042839 | Pride
Wall-forming bodies Tmt Eimeria necatrix Oocyst wall Lc-ms/ms Comparative proteomics 
ProteomicsTMT combined with LC–MS/MS technique to detect protein markers in gastroesophageal junction adenocarcinoma
Gastroesophageal junction adenocarcinoma (GEJA) is a malignant tumor located at the junction of the esophagus and stomach, and its incidence is increasing yearly, while early screening for biological markers is limited. Tandem mass tag (TMT) combined with liquid chromatography-tandem mass spectromet...
ORGANISM(S): Homo Sapiens 
2021-12-08 | PXD030228 |
ProteomicsProteomics in exploring the endothelial dysfunction mechanism induced by serum exosomes from diabetic retinopathy and diabetic nephropathy patients
In this study, we used human glomerular endothelial cells (HGECs) as cells model, proteomics TMT-based LC-MS/MS was employed to discover the underlying mechanisms of endothelial dysfunction caused by SExos from diabetic retinopathy and nephropathy patients.
ORGANISM(S): Homo Sapiens 
2021-12-29 | PXD030660 |
ProteomicsMultiple sclerosis biomarker discovery in cerebrospinal fluid using glycopeptide enrichment, TMT labeling and LC-MS/MS
Multiple sclerosis biomarker discovery in pooled cerebrospinal fluid (CSF) using glycopeptide enrichment, TMT labeling and LC-MS/MS. Comparing 3 pools of CSF from relapsing-remitting MS (RRMS) patients to 3 pools of CSF from patients with other neurological diseases (OND). To reveal protein groups a...
ORGANISM(S): Homo sapiens (Human) 
2016-10-13 | PXD004540 | Pride
Human Cerebrospinal fluid Tmt Discovery Glycopeptide enrichment Lc-ms/ms 
ProteomicsA novel differential ion mobility interface expands the depth of proteome coverage and the sensitivity of multiplex proteomic measurements
We present a new high field asymmetric waveform ion mobility spectrometry (FAIMS) interface that can be coupled to the Orbitrap Tribrid mass spectrometers. The interface provides several advantages over previous generations of FAIMS devices including ease of operation, robustness, and high ion trans...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2018-04-19 | MSV000082293 | MassIVE
ProteomicsOne-STAGE Tip Method for TMT based Proteomic Analysis of Minimal Amount of Cells
LC-MS-based profiling of proteomes with isobaric tag labeling from low-quantity biological and clinical samples, including needle-core biopsies and laser capture microdissection, has been challenging due to limited amount and sample loss during preparation. To address this problem, we developed OnM ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-04-18 | MSV000091734 | MassIVE
ProteomicsThe parallel reaction monitoring (PRM) target sequencing based on the comparative proteomic profiling in sheep spermatozoa under non-capacitating (NC) and capacitating (CAP) conditions in vitro using a liquid chromatography-tandem mass spectrometry (LC-MS/MS) combined with tandem mass tag (TMT) labeling strategy
To verify protein expression levels obtained by TMT LC-MS/MS analysis strategy, the expression levels of differentially abundant proteins in NC and CAP groups were selected and quantified by a PRM assay.
ORGANISM(S): Bos taurus (Bovine) 
2022-07-14 | PXD034330 | Pride
Spermatozoa Prm Tmt Proteomic Lc-ms/ms Capacitation 
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