Tryptic peptides

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Proteomics (10628)
Unknown (709)
Other (16)
Transcriptomics (7)
Multiomics (6)
Genomics (5)
Metabolomics (3)

Organisms

Homo sapiens (131)
Mus musculus (36)
Mus musculus (28)
Escherichia coli (10)
Staphylococcus aureus (5)
Bos taurus (4)
Rattus rattus (3)
Bacillus subtilis subsp. subtilis str. 168 (3)
Hordeum vulgare (2)
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cellular organisms (2)
Aspergillus flavus NRRL3357 (1)
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C13236 (1)
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Mammuthus primigenius (1)
Oryza sativa (1)

Organisms

Hordeum vulgare (1)
Staphylococcus epidermidis (1)
Homo sapiens (1)

Repository

pride (10125)
MassIVE (273)
jPOST (136)
iProX (38)
PeptideAtlas (30)
PanoramaPublic (18)
GPMDB (13)
biostudies-arrayexpress (8)
NODE (6)
ENA (5)
geo (2)
MetaboLights (2)
PAXDB (2)
GNPS (1)

Tissue

Cell culture (2222)
Epithelial cell (609)
Brain (592)
Permanent cell line cell (353)
Blood plasma (284)
Liver (273)
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Blood (211)
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Heart (185)
Whole body (179)
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Blood serum (131)
Blood cell (125)
Cell suspension culture (124)
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Early embryonic cell (82)
Others (27)
Breast (4)
Cell line (3)

Disease

Disease free (260)
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Acute leukemia (100)
Alzheimer's disease (79)
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Malignant neoplasm of ovary (55)
Parkinson's disease (54)
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Lung cancer (43)
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Trypanosomiasis (27)
Amyotrophic lateral sclerosis (25)
Prostate cancer (24)
Hepatocellular carcinoma (23)
Multiple myeloma (23)
Obesity (23)
Pancreatic cancer (22)
Not Available (13)
Triple-receptor negative breast cancer (4)
Obsolete hepatitis B virus related hepatocellular carcinoma (2)

Technology Type

Mass Spectrometry (10125)
Shotgun proteomics (5655)
Bottom-up proteomics (1935)
Affinity purification coupled with mass spectrometry proteomics (1155)
Data-dependent acquisition (1073)
Gel-based experiment (780)
Data-independent acquisition (541)
SWATH MS (304)
Top-down proteomics (238)
Chemical cross-linking coupled with mass spectrometry proteomics (207)
SRM/MRM (140)
HDMSE (58)
All-ion fragmentation (54)
DiaPASEF (44)
MSE (39)
Affinity proteomics (37)
Mass spectrometry imaging (20)
Metaproteomics (12)
Proteogenomics (11)
Immunopeptidomics (8)
Glycoproteomics (4)
RNA mass spectrometry (2)
Mass spectrometry (1)
Mass spectrometry assay (1)
ITRAQ reagent (1)
PAcIFIC (1)
Sodium dodecyl sulfate polyacrylamide gel electrophoresis (1)

Instrument Platform

QExactive Plus (Thermo) (75)
Q Exactive (39)
LTQ Orbitrap Elite (24)
Orbitrap Fusion Lumos (19)
LTQ Orbitrap Velos (15)
LTQ Orbitrap (14)
Q Exactive Plus (13)
Instrument (13)
Q Exactive HF (13)
Orbitrap Exploris 480 (12)
Orbitrap Eclipse (10)
Orbitrap Fusion (10)
Q Exactive HF-X (9)
LTQ (8)
Orbitrap Fusion ETD (6)
TimsTOF Pro (6)
TimsTOF fleX (6)
LTQ XL (5)
LTQ Orbitrap XL (4)
MaXis (4)
MS:1000031 (3)
Orbitrap Ascend (3)
TripleTOF 5600 (3)
ACQUITY UPLC I-Class (2)
LTQ Orbitrap XL ETD (2)
LTQ Velos (2)
LTQ XL ETD (2)
TimsTOF Pro 2 (2)
TripleTOF 6600 (2)
Illumina NovaSeq X (1)

Publication Date

2025 (1482)
2022 (1273)
2024 (1220)
2023 (1184)
2026 (1155)
2021 (1078)
2020 (744)
2019 (642)
2018 (552)
2017 (490)
2016 (345)
2015 (250)
2014 (134)
2013 (46)
2009 (5)
2012 (5)
2011 (4)
2010 (4)
2008 (1)
2007 (1)

UNIPROT ID/AC

1433B_HUMAN (2)
1433E_HUMAN (2)
1433F_HUMAN (2)
1433G_HUMAN (2)
1433S_HUMAN (2)
1433T_HUMAN (2)
1433Z_HUMAN (2)
2A5D_HUMAN (2)
2A5E_HUMAN (2)
2A5G_HUMAN (2)
2AAA_HUMAN (2)
2AAB_HUMAN (2)
2ABA_HUMAN (2)
3HIDH_HUMAN (2)
4F2_HUMAN (2)
5NTC_HUMAN (2)
6PGD_HUMAN (2)
6PGL_HUMAN (2)
8ODP_HUMAN (2)
9606.ENSP00000233596 (2)
9606.ENSP00000291295 (2)
9606.ENSP00000299157 (2)
9606.ENSP00000366999 (2)
9606.ENSP00000367034 (2)
9606.ENSP00000370119 (2)
9606.ENSP00000378570 (2)
9606.ENSP00000383938 (2)
9606.ENSP00000400906 (2)
9606.ENSP00000409666 (2)
9606.ENSP00000442453 (2)

ENSEMBL ID

ENSG00000170477 (22)
ENSG00000147251 (14)
ENSG00000247315 (11)
ENSG00000204131 (4)

Metabolite Name

284.2716 (1)
256.24036 (1)
284.27032 (1)
284.27159 (1)
256.24038 (1)
256.24014 (1)
256.24067 (1)
777.53706 (1)
755.51049 (1)
284.27176 (1)
794.52178 (1)
795.53534 (1)
817.51946 (1)
738.53115 (1)
793.51864 (1)
782.54241 (1)
783.54426 (1)
821.54705 (1)
754.53676 (1)
822.54687 (1)
765.51542 (1)
804.55144 (1)
749.5187 (1)
525.30519 (1)
781.53815 (1)
790.51734 (1)
775.5281 (1)
716.50857 (1)
743.53164 (1)
340.20777 (1)

First Public Date

2025 (1)
2021 (1)
2020 (1)
2017 (1)
2013 (1)

Modification

4x(15)N labeled L-arginine (33)
2x(15)N labeled L-lysine (30)
N6-dimethyl-L-lysine (19)
N6 (18)
57.021464 (15)
15.994915 (14)
4-tetrahydrothiazine-3-carboxylic acid (12)
Not available (7)
4x(2)H labeled dimethylated residue (5)
42.010565 (4)
71.037114 (4)
4 (3)
-17.026549 (2)
Heavy form - site K (2)
-18.010565 (1)
15.977156 (1)
15.99491 (1)
1x(15)N labeled L-valine (1)
227.126991 (1)
26.01565 (1)
3'' (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
4-dinitrophenyl modified residue (1)
4x(2)H labeled dimethylated L-lysine (1)
56.026215 (1)
57.02146 (1)
79.966331 (1)
9.030194 (1)
Heavy form (1)
Methionine (1)

Study type

Transcription profiling by array (4)
Proteomic profiling by mass spectrometer (2)
Transcription profiling by tiling array (1)
RNA-seq of coding RNA (1)

Release Date

2021 (56)
2022 (53)
2019 (44)
2020 (42)
2018 (42)
2016 (41)
2017 (41)
2012 (39)
2024 (36)
2015 (35)
2009 (33)
2025 (33)
2014 (33)
2023 (32)
2010 (31)
2013 (28)
2011 (22)
2008 (20)
2007 (15)
2006 (9)
2005 (7)
2004 (6)
1999 (3)
2026 (2)
2003 (2)
2001 (2)
2000 (2)
1998 (2)
1997 (2)
2002 (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (125)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (68)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (36)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (35)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (24)
North Carolina State University (24)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (19)
Functional Proteomics, ICR (18)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (16)
ETH Zurich (14)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany (13)
General and molecular microbiology, Institute for chemistry and biology of the marine environment (ICBM), Carl von Ossietzky University of Oldenburg, Oldenburg, Germany (13)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (13)
USDA-ARS (13)
Cancer Science Institute of Singapore (CSI), National University of Singapore (NUS) (12)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (12)
The Institute of Cancer Research (12)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (12)
CNIO (11)
Cornell University (11)
Head of Proteomics (11)
Pacific Northwest National Laboratory (11)
Associate Member Developmental Neurobiology St. Jude Children's Research Hospital (10)
Associate Member, St. Jude Faculty Developmental Neurobiology St. Jude Children's Research Hospital Memphis, TN-38105 (10)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (10)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (10)
Proteomics Core Facility, Biozentrum, University of Basel, Switzerland (10)
Cambridge Institute for Medical Research, University of Cambridge (9)
Centre for Proteome Research, University of Liverpool, Liverpool, UK (9)
Karolinska Institutet, Stockholm, Sweden (9)

Tags

xref:PubMed:19367707 (1)
xref:PubMed:34505004 (1)

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In-source fragmentation and the sources of partially tryptic peptides in shotgun proteomics.

Not available

S-EPMC3584699 | biostudies-literature

Anticarcinogenic cationic peptides derived from tryptic hydrolysis of β-lactoglobulin.

Not available

S-EPMC11757936 | biostudies-literature

Approaching cellular resolution and reliable identification in mass spectrometry imaging of tryptic peptides.

Not available

S-EPMC6096711 | biostudies-literature

MS imaging of tryptic peptides in mouse brain measured at 50 µm pixel size

A coronal mouse brain section that was measured at 50µm pixel size revealed detailed histological structures such as the ependyma (consisting of one to two cell layers, which was confirmed by HE staining).

ORGANISM(S): Mus musculus (Mouse)

2018-08-08 | PXD003172 | Pride

Alkylating tryptic peptides to enhance electrospray ionization mass spectrometry analysis.

Not available

S-EPMC3075559 | biostudies-literature

Improved Detection of Tryptic Peptides from Tissue Sections Using Desorption Electrospray Ionization Mass Spectrometry Imaging.

Not available

S-EPMC11066963 | biostudies-literature

Analysis of Histone Modifications from Tryptic Peptides of Deuteroacetylated Isoforms.

Not available

S-EPMC3289288 | biostudies-literature

Virtual Screening and Prediction of Binding of Caprine CSN1S2 Protein Tryptic Peptides to Glucokinase.

Not available

S-EPMC5723197 | biostudies-literature

Improved detection of tryptic immunoglobulin variable region peptides by chromatographic and gas-phase fractionation techniques.

Circulating antibodies provide valuable information about an individual’s immune status and constitute a significant portion of the human plasma proteome. Proteomic analysis of plasma is challenged by the large dynamic concentration range of plasma proteins, including antibodies. Peptide fractionati...

ORGANISM(S): Homo sapiens (Human)

2024-08-09 | PXD046072 | Pride

Peptide fractionation Antibody Mass spectrometry Immune repertoire Multi-dimensional chromatography Ion-mobility Bottom-up proteomics De novo sequencing Plasma proteomics

Gas-phase fragmentation characteristics of benzyl-aminated lysyl-containing tryptic peptides.

Not available

S-EPMC2927711 | biostudies-literature

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11368 Results

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Organisms

Organisms

Repository

Tissue

Disease

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Instrument Platform

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UNIPROT ID/AC

ENSEMBL ID

Metabolite Name

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Modification

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Lab affiliation

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