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MetabolomicsRetinal tissue knockout to study efflux of cholesterol (AGCA1/G1 double KO - TY and LysM cre)
Not available
ORGANISM(S): Mus musculus 
ST000681 | MetabolomicsWorkbench
MetabolomicsRetinal tissue knockout to study efflux of cholesterol (AGCA1/G1 double KO - TY and LysM cre) - part II
Not available
ORGANISM(S): Mus musculus 
ST000682 | MetabolomicsWorkbench
ProteomicsRetroelement Ty1 Integrase interactome identified using tandem chromatin affinity purification ( TChAP) after in vivo crosslink in yeast Saccharomyces cerevisiae
To identify yeast proteins associated with Ty1 integrase (IN) that could regulate Ty1 replication, we co-purified IN partners using the tandem chromatin affinity purification procedure after in vivo cross-link (TChAP), which we developed previously (Nguyen et al. 2014). We first identified RNA Pol I...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2022-11-17 | PXD027420 | Pride
Rna polymerase iii Yeast Ck2 Integrase Ty1 
TranscriptomicsRetrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots
Using a TIP-seq protocol (specifically isolating transposon insertion junctions) we determined that the Ty1 retrotransposon targets tRNA genes and, in particular, we determined that the transposon inserts into nucleosomal DNA in an asymmetric pattern. TIP-seq recovery of transposon insertion junctio...
ORGANISM(S): Saccharomyces cerevisiae 
2012-01-01 | E-GEOD-33986 | biostudies-arrayexpress
GenomicsAcinetobacter sp. TY1
Acinetobacter sp. TY1 Genome sequencing
PRJNA1199675 | ENA
GenomicsEnterococcus faecalis strain:TY1 | isolate:flatfish
Enterococcus faecalis strain:TY1 | isolate:flatfish Genome sequencing
PRJNA480550 | ENA
GenomicsTY1-H2A-ChIP-seq datasets of Trypanosoma brucei
TY1-H2A-ChIP-seq datasets of Trypanosoma brucei
PRJNA607758 | ENA
GenomicsP. aeruginosa TY1-PA3898 ChIP-seq
P. aeruginosa TY1-PA3898 ChIP-seq
PRJNA491517 | ENA
GenomicsTime-Dependent Nucleosome Remodeling During Galactose-Induced Ty1 Expression in Saccharomyces cerevisiae
Time-Dependent Nucleosome Remodeling During Galactose-Induced Ty1 Expression in Saccharomyces cerevisiae
PRJNA1490604 | ENA
TranscriptomicsTranscription profiling by array of four strains of budding yeast with inversions engineered between TY1 elements against matching controls
Gene expression changes due to genome region inversions was studied. Four strains of Saccharomyces cerevisiae strains with inversions engineered between TY1 elements were compared to matching controls.
ORGANISM(S): Saccharomyces cerevisiae 
2014-11-05 | E-MTAB-2613 | biostudies-arrayexpress
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