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ProteomicsQUEST-MS for plasma biomarkers complementing the specificity of PSA test
To explore plasma biomarkers complementing the specificity of PSA test, we developed a unique proteomic technology QUEST-MS (Quick Enrichment of Small Targets for Mass Spectrometry). The QUEST-MS method based on 96-well formatted sequential reversed phase chromatography allowing efficient enrichment...
ORGANISM(S): Homo sapiens (Human) 
2014-01-28 | PXD000383 | Pride
Human Plasma 
ProteomicsQUEST-MS for plasma biomarkers complementing the specificity of PSA test
To explore plasma biomarkers complementing the specificity of PSA test, we developed a unique proteomic technology QUEST-MS (Quick Enrichment of Small Targets for Mass Spectrometry). The QUEST-MS method based on 96-well formatted sequential reversed phase chromatography allowing efficient enrichment...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2025-07-02 | MSV000098420 | MassIVE
ProteomicsProteomic Signatures Involved in Cardiac Recovery After Mechanical Unloading
Heart failure is a leading cause of death worldwide, and patients with severe heart failure require left ventricular assist device (LVAD) support. LVAD is usually implanted as a bridge to transplantation (BTT) or destination but can be removed if the patient’s cardiac function recovers. We performed...
ORGANISM(S): Homo sapiens (Human) 
2026-08-21 | PXD082534 | Pride
Human Heart Lvad Lc-ms/ms 
MetabolomicsMetabolite profiling of the fermentation process of yamahai-ginjo-shikomi Japanese sake
Sake is a traditional Japanese alcoholic beverage prepared by multiple parallel fermentation of rice. The fermentation process of yamahai-ginjo-shikomi sake is mainly performed by three microbes, Aspergillus oryzae, Saccharomyces cerevisiae, and Lactobacilli; the levels of various metabolites fluctu...
2018-06-29 | MTBLS451 | MetaboLights
ProteomicsComparison of efficacy in immunfopeptide identification from HCT116 by "with" FAIMS
HLA class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR threshold by...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023771 | JPOST Repository
ProteomicsIdentification of HLA class I immunopeptide from human colon tissue (Normal)
HLA Class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Personalized database which includes patient-specific somatic mutations obtained from whole exome sequencing (WES) data was used for database search. Identification results were filt...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023804 | JPOST Repository
ProteomicsIdentification of HLA class I immunopeptide from human colon tissue (Tumor)
HLA Class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Personalized database which includes patient-specific somatic mutations obtained from whole exome sequencing (WES) data was used for database search. Identification results were filt...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023805 | JPOST Repository
ProteomicsComparison of efficacy in immunopeptide identification from HCT116 by "without" FAIMS
HLA class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos without FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR threshol...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023770 | JPOST Repository
ProteomicsGlobal identification of HCT116 immunopeptides by FAIMS-assisted immunopeptidomics
HLA Class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR thresholds b...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023773 | JPOST Repository
OtherLC/MS/MS data from 46 serum samples
Data from PeptideAtlas, [[http://www.peptideatlas.org/PASS/PASS00510 PASS00510]]. File: SCC7.mzml. From PeptideAtlas: {{i}}Antibody-assisted mass spectrometric profiling of serum exosomes identified CD91 as an exosomal biomarker for lung adenocarcinoma. {{/i}}
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM32310002137 | GPMDB
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