Ueno T T - OmicsDI

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Unknown (1748)
Transcriptomics (42)
Genomics (15)
Proteomics (11)
Metabolomics (4)

Organisms

Homo sapiens (44)
Mus musculus (13)
Xenopus laevis (6)
Hymenochirus boettgeri (1)
Oryza sativa (1)
Rattus norvegicus (1)
Glycine max (1)
Canis lupus familiaris (1)

Repository

biostudies-arrayexpress (42)
EGA (15)
pride (7)
jPOST (4)
MetaboLights (4)

Tissue

Bone marrow (1)
Cell suspension culture (1)
Epithelial cell (1)
Kidney (1)
Lymph node (1)
T cell (1)
Tendon (1)
Tendon cell (1)

Disease

Acute leukemia (1)

Technology Type

Mass Spectrometry (7)
Mass spectrometry (4)
Shotgun proteomics (3)
Bottom-up proteomics (2)
Data-dependent acquisition (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Capillary electrophoresis MS - negative (4)
Capillary electrophoresis MS - positive (4)

Publication Date

2016 (11)
2014 (6)
2013 (6)
2010 (6)
2011 (5)
2024 (5)
2015 (4)
2012 (3)
2023 (3)
2022 (2)
2021 (2)
2008 (1)
2025 (1)
2020 (1)
2026 (1)

CHEBI ID

CHEBI:15428 (4)
CHEBI:10049 (3)
CHEBI:10072 (3)
CHEBI:1026 (3)
CHEBI:1148 (3)
CHEBI:1157 (3)
CHEBI:132546 (3)
CHEBI:132958 (3)
CHEBI:134206 (3)
CHEBI:135063 (3)
CHEBI:139328 (3)
CHEBI:14314 (3)
CHEBI:143269 (3)
CHEBI:14336 (3)
CHEBI:1456 (3)
CHEBI:14973 (3)
CHEBI:15318 (3)
CHEBI:15346 (3)
CHEBI:15351 (3)
CHEBI:15354 (3)
CHEBI:15355 (3)
CHEBI:15356 (3)
CHEBI:15380 (3)
CHEBI:15422 (3)
CHEBI:1547 (3)
CHEBI:15479 (3)
CHEBI:15531 (3)
CHEBI:15551 (3)
CHEBI:15553 (3)
CHEBI:15573 (3)

Metabolite Name

(Methylthio)acetate (2)
1-Aminoethylphosphonate (2)
10-Hydroxydecanoate (2)
2',3'-cCMP (2)
2,3-DPG (2,3-Disphospho-D-glycerate) (2)
2,3-Pyridinedicarboxylate (2)
2,4-Dihydroxypyrimidine-5-carboxylate (2)
2,5-Dihydroxybenzoate (2)
2-Amino-3-phosphonopropionate (2)
2-Aminoethylphosphonate (2)
2-Deoxyglucose 6-phosphate (2)
2-Deoxyribose 1-phosphate (2)
2-Furoate (2)
2-Hydroxy-4-methylpentanoate (2)
2-Hydroxybutyrate (2)
2-Hydroxyglutarate (2)
2-Hydroxyisobutyrate (2)
2-Hydroxyoctanoate (2)
2-Hydroxypentanoate (2)
2-Hydroxyphenylacetate (2)
2-Isopropylmalate (2)
2-Oxoadipate (2)
2-Oxobutyrate (2)
2-Oxoglutarate (2)
2-Oxoisopentanoate (2)
2-Oxooctanoate (2)
2-Quinolinecarboxylate (2)
2-Thiopheneacetate (2)
2PG (D-Glycerate 2-phosphate) (2)
3',5'-Cyclic dAMP (2)

Study type

Transcription profiling by array (31)
RNA-seq of coding RNA (4)
Unknown experiment type (2)
Translation profiling (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (223)
2022 (211)
2021 (178)
2024 (177)
2023 (176)
2020 (169)
2019 (110)
2018 (104)
2017 (71)
2016 (67)
2015 (57)
2014 (47)
2012 (38)
2013 (37)
2010 (30)
2011 (28)
2026 (24)
2008 (7)
2007 (6)
2006 (6)
1999 (5)
2000 (4)
2009 (3)
2005 (3)
2002 (3)
2004 (2)
2003 (2)
2001 (1)
1998 (1)

Lab affiliation

Centre for Drug Safety Science, Dept Pharmacology and Therapeutics, Institute for Systems, Molecular and Integrative Biology, University of Liverpool (1)
Centre for Drug Safety Science, Dept Pharmacology and Therapeutics, Institute of Systems, Molecular and Integrative Biology, University of Liverpool (1)
Department of Physiology,Juntendo University Graduate School of Medicine (1)
Icahn School of Medicine at Mount Sinai (1)
Laboratory for Mucosal Immunity, Center for Integrative Medical Sciences, RIKEN Yokohama Institute, Yokohama, Japan (1)
Laboratory of Quantitative Biology, Department of Gene Mechanisms, Division of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Japan (1)
Penn State College of Medicine (1)

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Identification of a Novel MAN1A1-ROS1 Fusion Gene Through mRNA-based Screening for Tyrosine Kinase Gene Aberrations in a Patient with Leiomyosarcoma.

Not available

S-EPMC8083907 | biostudies-literature

Managing diffuse intrinsic Pontine glioma (DIPG) through japan's pediatric home medical care (PHMC) system, originally designed for medically complex children.

Not available

S-EPMC12481844 | biostudies-literature

HTLV-1 infection promotes excessive T cell activation and transformation into adult T cell leukemia/lymphoma.

Not available

S-EPMC8670839 | biostudies-literature

Developmental gene expression of Xenopus laevis J strain [stage]

Comprehensive RNA-seq experiments to measure the expression of homoeologs across different developmental stages, as a part of the Xenopus laevis genome project. This work is funded by Agency Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT; "Genome Science" Gra...

ORGANISM(S): Xenopus laevis

2016-10-24 | E-GEOD-73430 | biostudies-arrayexpress

Aging and CMV Infection Affect Pre-existing SARS-CoV-2-Reactive CD8⁺ T Cells in Unexposed Individuals.

Not available

S-EPMC9261342 | biostudies-literature

KDR-dependent tyrosine phosphorylation in HTLV-1 transformed cells

Human T-cell leukemia virus type 1 (HTLV-1) is linked to the development of adult T-cell leukemia (ATL) and the neuroinflammatory disease, HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP). The HTLV-1 Tax oncoprotein regulates viral gene expression and the NF-kB pathway to promote ...

ORGANISM(S): Homo sapiens (Human)

2024-06-14 | PXD051981 | Pride