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MetabolomicsMulti-omics analysis of differential expression profiles in Vibrio natriegens strain VCOD-2 under optimal and high-salinity conditions

This study employs integrated multi-omics analysis to systematically investigate the proteome and metabolome of marine bacterium Vibrio natriegens strain VCOD-2 (ATCC 14048) under optimal salinity (3% NaCl) and high-salinity stress (8% NaCl) conditions, aiming to reveal the molecular me...

2026-03-18 | MTBLS14070 | MetaboLights
ProteomicsV. natriegens proteome under nutrient limitation
This project is about the proteome of V. natriegens ATCC14048 under various nutrient conditions.
ORGANISM(S): Vibrio natriegens 
2025-04-30 | PXD045789 | Pride
Nutrient limitation V. natriegens 
ProteomicsV. natriegens proteome under nutrient limitation
This project is about the proteome of V. natriegens ATCC14048 under various nutrient conditions (the organism at right side was mislabeled as E. coli)
ORGANISM(S): Escherichia coli O11 
2025-04-30 | PXD057334 | Pride
Nutrient limitation V. natriegens 
ProteomicsRationally designed chromosome fusion is not a limiting factor for rapid growth of Vibrio natriegens
DNA replication prior to cell division is essential for the proliferation of all cells. Bacterial chromosomes are replicated bidirectionally from a single origin of replication, with replication proceeding at about 1000 bp per second. For the best-studied model organism, Escherichia coli, this trans...
ORGANISM(S): Vibrio natriegens 
2024-04-02 | PXD049476 | Pride
Vibrio natriegens 
TranscriptomicsRNA-seq validation experiments of prophage-free variants from Vibrio natriegens ATCC 14048
After the prophages of the Vibrio natriegens strain were deleted, RNA-seq experiments were conducted to obtain DGE-profiles in the presence and absence of the two prophages VNP1 and VNP2 in the exponential growth phase.
ORGANISM(S): Vibrio natriegens 
2019-07-15 | E-MTAB-7877 | biostudies-arrayexpress
TranscriptomicsSystems-level Responses to Salinity and Temperature Variations in the Marine Bacterium Vibrio natriegens
Vibrio natriegens strain ATCC 14048 is a salt marsh isolate with a notably rapid growth rate that has garnered considerable interest for biotechnological applications. We used systems-level tools (i.e. metabolomics, transcriptomics, proteomics) to characterize its physiological response to different...
ORGANISM(S): Vibrio natriegens 
2021-09-18 | GSE184146 | GEO
ProteomicsVibrio natriegens Systems & Synthetic Biology: Proteome Profile (Temperature & Salinity)
Vibrio natriegens is a rapidly growing salt marsh bacterium that is being developed as a synthetic biology chassis. We characterized its physiological response to different salinities and temperatures in order to optimize culturing conditions and understand its adaptations to a salt marsh environmen...
ORGANISM(S): Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 
2021-09-15 | PXD027874 | Pride
Synthetic biology Proteomics Vibrio natriegens Vibrio Nanolc-ms/ms Proteome 
TranscriptomicsRNAseq data for Nitrogenase regulation in Vibrio natriegens differs from other γ-proteobacteria
Regulation of nitrogenase, which converts nitrogen gas (N2) into ammonium (NH4+), typically involves a conserved set of regulatory proteins across diverse N2-fixing (diazotrophic) bacteria. However, the interactions and relative influence of these regulators can vary between species. Thus, one canno...
ORGANISM(S): Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 
2026-06-04 | GSE333724 | GEO
GenomicsChIP-seq data for Nitrogenase regulation in Vibrio natriegens differs from other γ-proteobacteria
Regulation of nitrogenase, which converts nitrogen gas (N2) into ammonium (NH4+), typically involves a conserved set of regulatory proteins across diverse N2-fixing (diazotrophic) bacteria. However, the interactions and relative influence of these regulators can vary between species. Thus, one canno...
ORGANISM(S): Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 
2026-06-01 | GSE333729 | GEO
GenomicsSystems-level Responses to Salinity and Temperature Variations in the Marine Bacterium Vibrio natriegens
Systems-level Responses to Salinity and Temperature Variations in the Marine Bacterium Vibrio natriegens
PRJNA763369 | ENA
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