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TranscriptomicsComprehensive identification of long non-coding RNAs expressed during zebrafish embryogenesis [RNA_seq]
Long non-coding RNAs (lncRNAs) comprise a diverse class of transcripts that structurally resemble mRNAs but do not encode proteins. Recent genome-wide studies in human and mouse have annotated lncRNAs expressed in cell lines and adult tissues, but a systematic analysis of lncRNAs expressed during ve...
ORGANISM(S): Danio rerio 
2011-11-17 | E-GEOD-32898 | biostudies-arrayexpress
GenomicsCanonical nucleosome organization at promoters forms during genome activation
The position of nucleosomes influences DNA accessibility to DNA-binding proteins. Genome-wide nucleosome profiles often report the observation of a canonical nucleosome organization at gene promoters where arrays of well-positioned nucleosomes emanate from nucleosome-depleted regions. It is unclear ...
ORGANISM(S): Danio rerio 
2013-10-18 | E-GEOD-44269 | biostudies-arrayexpress
TranscriptomicsChromatin signature of embryonic pluripotency is established during zygotic genome activation [Danio rerio]
[PROJECT] After fertilization the embryonic genome is inactive until transcription is initiated during the maternal-zygotic transition (MZT). This universal process coincides with the formation of pluripotent cells, which in mammals can be used to generate embryonic stem (ES) cells. To study the cha...
ORGANISM(S): Danio rerio 
2010-01-25 | E-GEOD-20023 | biostudies-arrayexpress
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