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TranscriptomicsTranscription profiling of Porphyromonas gingivalis wild type and mutant PG1432::ermF to identify genes which have their expression influenced by PG1432
The aim of this experiment is to ascertain which genes have their expression influenced by PG1432. PG1432 encodes a putative sensor histidine kinase which is part of two component signal transduction that was highly up-regulated in P. gingivalis mature biofilm cells. PG1432 was disrupted in P. gingi...
ORGANISM(S): Porphyromonas gingivalis 
2010-01-11 | E-TABM-546 | biostudies-arrayexpress
OtherSystems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit.
PRIDE ID: 21331, ae1_5: PE47_1, PE48_1, PE5_4, PE6_4, PE7_4, PE8_4, control_25, control_26. Data published as part of Mol Syst Biol. 2012, 8:606 . From the Abstract: {{i}} ... To reveal the dynamic systems behaviour of leaf development, we profiled Arabidopsis leaf number six in depth at four diffe...
ORGANISM(S): Thale_cress 
GPM11210004321 | GPMDB
Resource Reanalysis 
GenomicsGermline Aberrations of PAX5 Cause Susceptibility to pre-B cell Acute Lymphoblastic Leukemia
A novel heterozygous germline variant, c.547G>A (p.Gly183Ser), in the paired box protein encoding gene, PAX5, was found to segregate with disease in two unrelated kindreds with autosomal dominant pre-B cell acute lymphoblastic leukemia (ALL). Leukemic cells from both families exhibited 9p deletion, ...
EGAS00001000447 | EGA
GenomicsWhole genome sequencing of pediatric BCR-ABL1 positive acute lymphoblastic leukemia
We performed whole-genome sequencing of 18 paired tumor/normal BCR-ABL1+ leukemia genomes and analyzed single nucleotide variations (SNVs), insertion/deletions, structural variations and copy number variations in the tumor and normal genomes
EGAS00001000253 | EGA
GenomicsGEenetic landscape of hypodiploid acute lymphoblastic leukemia
Hypodiploid acute lymphoblastic leukemia (ALL) is an aggressive leukemia characterized by aneuploidy and poor outcome. The genetic basis of hypodiploid ALL is unknown. Here, using complementary genome-wide profiling approaches, we show that hypodiploid ALL comprises two subtypes that differ in the s...
EGAS00001000380 | EGA
UnknownInhibition of endothelial FAK activity prevents tumor metastasis by enhancing barrier function
Not available
S-JCBD-201307067 | bioimages
TranscriptomicsTranscription profiling by tiling array of Arabidopsis thaliana leaf growth and development
Transcriptome changes during leaf growth and development were profiled. We extracted RNA from Arabidopsis leaf number six from plants growing in stable and controlled experimental conditions at four different growth stages both at the end-of-day (EOD) and end-of-night (EON). The experiment was perfo...
ORGANISM(S): Arabidopsis thaliana 
2012-12-12 | E-MTAB-1056 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis thaliana leaves grown in different laboratories
Arabidopsis plants were grown in 6 laboratories, and RNA was labeled and hybridized to AGRONOMICS1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2010-03-04 | E-TABM-917 | biostudies-arrayexpress
GenomicsPCGP BALL-PAX5 WES - samples
Description not provided
EGAD00001001056 | EGA
GenomicsPCGP INF WES - samples
DATA FILES FOR PCGP SJINF WES
EGAD00001001245 | EGA
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