Wang C Y CY - OmicsDI

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Unknown (940)
Transcriptomics (54)
Proteomics (26)
Genomics (13)
Metabolomics (3)

Organisms

Homo sapiens (46)
Daphnia pulex (9)
Mus musculus (9)
Rattus norvegicus (4)
Escherichia coli (3)
Lonicera japonica (1)
Pinus taeda (1)
Branchiostoma belcheri (1)
Phytophthora sojae (1)
Macaca mulatta (1)
Zea mays (1)
Oryza sativa (1)
Rattus rattus (1)
Mycobacterium tuberculosis (1)
Glycine max (1)
Oryza sativa Japonica Group (1)
Arabidopsis thaliana (1)
Bos taurus (1)
Mus (1)
Naja melanoleuca (1)

Repository

biostudies-arrayexpress (57)
pride (18)
EGA (10)
MassIVE (5)
iProX (3)
MetaboLights (3)

Tissue

Cell culture (4)
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Prostate cancer cell line (1)
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Breast cancer (1)
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Colorectal cancer (1)
Disease free (1)
Malignant neoplasm of ovary (1)
Prostate adenocarcinoma (1)
Type 1 diabetes mellitus (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (9)
Bottom-up proteomics (5)
Mass spectrometry (3)
Data-independent acquisition (2)
Gel-based experiment (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
MSE (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive Plus (4)
Liquid Chromatography MS - positive - reverse phase (2)
GenePix 4000B [Axon Instruments] (1)
Illumina HiSeq 2000 (1)
Orbitrap Fusion Lumos (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)
Applied biosystems / mds sciex 4700 proteomics analyzer (1)
Applied biosystems / mds sciex q trap (1)
Applied biosystems / mds sciex qstar (1)
Thermo lcq deca (1)
Thermo lcq deca xp (1)
Thermo ltq (1)
UNKNOWN UNKNOWN (1)
Waters q-tof (1)

Publication Date

2011 (12)
2012 (10)
2010 (9)
2024 (7)
2025 (6)
2016 (5)
2015 (5)
2009 (5)
2023 (4)
2020 (4)
2013 (3)
2019 (3)
2014 (2)
2006 (2)
2005 (2)
2022 (2)
2017 (1)
2008 (1)
2021 (1)
2007 (1)

CHEBI ID

CHEBI:12962 (2)
CHEBI:15318 (2)
CHEBI:15354 (2)
CHEBI:15355 (2)
CHEBI:15698 (2)
CHEBI:15729 (2)
CHEBI:16015 (2)
CHEBI:16108 (2)
CHEBI:16264 (2)
CHEBI:16450 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16742 (2)
CHEBI:16750 (2)
CHEBI:16761 (2)
CHEBI:16919 (2)
CHEBI:17050 (2)
CHEBI:17196 (2)
CHEBI:17202 (2)
CHEBI:17230 (2)
CHEBI:17239 (2)
CHEBI:17287 (2)
CHEBI:17319 (2)
CHEBI:17345 (2)
CHEBI:17368 (2)
CHEBI:17552 (2)
CHEBI:17562 (2)
CHEBI:17596 (2)
CHEBI:17748 (2)

Metabolite Name

(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(N(omega)-L-arginino)succinic acid (1)
(R)-3-(4-hydroxyphenyl)lactic acid (1)
1,2,4-triazines (1)
1,4-benzodiazepines (1)
1-benzopyrans (1)
1-hydroxy-2-unsubstituted benzenoids (1)
1-hydroxy-4-unsubstituted benzenoids (1)
2'-deoxyadenosine 5'-monophosphate (1)
2'-deoxycytidine (1)
2'-deoxycytosine 5'-monophosphate (1)
2'-deoxyguanosine (1)
2'-deoxyguanosine 3'-monophosphate (1)
2'-deoxyuridine (1)
2,6-dimethyl-3-benzazocines (1)
2-arylbenzofuran flavonoids (1)
2-benzimidazolylcarbamic acid esters (1)
2-benzopyrans (1)
2-hydroxyglutaric acid (1)
2-oxoadipic acid (1)
2-oxobutanoic acid (1)
2-oxosuccinamic acid (1)
3'-AMP (1)
3'-UMP (1)
3,4-dihydrocoumarins (1)
3-Oxoglutaric acid (1)
3-hydroxy-2-methylpropanoyl-CoA (1)
3-phosphoglyceric acid (1)
3-phosphonatooxypyruvate (1)
4-hydroxyproline (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (27)
RNA-seq of coding RNA (9)
ChIP-chip by tiling array (5)
Transcription profiling by tiling array (4)
RNA-seq of non coding RNA (4)
ChIP-seq (3)
Comparative genomic hybridization by array (2)
Unknown experiment type (1)
Transcription profiling by RT-PCR (1)
Methylation profiling by array (1)

Release Date

2023 (102)
2022 (102)
2021 (100)
2025 (97)
2024 (93)
2020 (74)
2016 (62)
2017 (51)
2019 (49)
2018 (48)
2015 (47)
2012 (31)
2011 (29)
2013 (28)
2014 (27)
2010 (16)
2026 (13)
2009 (12)
2008 (7)
2006 (4)
2005 (2)
2007 (2)
2003 (1)

Lab affiliation

Genomics Research Center, Academia Sinica, Taipei, 11529 Taiwan (3)
, Dana-Farber Cancer Institute, Harvard Medical School 360 Longwood Avenue Longwood Center, LC4117 Boston, MA 02215 (1)
Biological Sciences Division, Pacific Northwest National Laboratory (1)
Cancer Science Institute of Singapore, National University of Singapore, Singapore (1)
Changchun University of Chinese Medicine (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University, and Key Laboratory of Carcinogenesis and Cancer Invasion, Ministry of Education (1)
Dept. of Orthopaedics and Traumatology The Chinese University of Hong Kong, Hong Kong, China (1)
Discipline of Physics, Chemistry and Earth Sciences, The University of Adelaide, South Australia, Australia (1)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI) (1)
Institute of Reproductive Health, Tong Ji Medical College, Hua Zhong University of Science and Technology, Wuhan, China. (1)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (1)
School of lifescience, Nanjing University, China (1)
Sequence database group (1)
The Hong Kong Polytechnic University (1)

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Insights into small-molecule compound CY-158-11 antibacterial activity against Staphylococcus aureus.

Not available

S-EPMC11520288 | biostudies-literature

Peptide Cy _RL-QN15 accelerates hair regeneration in diabetic mice by binding to the Frizzled-7 receptor.

Not available

S-EPMC11668943 | biostudies-literature

Promoter proximal pausing and its regulation by c-Myc in embryonic stem cells: ChIP-Seq

Recruitment of the RNA Polymerase II (Pol II) transcription initiation apparatus to promoters by specific DNA binding transcription factors is well recognized as a key regulatory step in gene expression. We describe here evidence that promoter-proximal pausing is a general feature of transcription ...

ORGANISM(S): Mus musculus

2010-04-02 | E-GEOD-20530 | biostudies-arrayexpress

Regulation of blood-testis barrier assembly in vivo by germ cells.

Not available

S-EPMC6137450 | biostudies-literature

Phyllosticta rizhaoensis sp. nov. causing leaf blight of Ophiopogon japonicus in China.

Not available

S-EPMC10956614 | biostudies-literature

Comparative genomic hybridization of 17 Borrelia burgdorferi isolates of varying pathogenicity and RST gene type to investigate genome plasticity

B. burgdorferi isolates differ in pathogenicity, and a correlation between RST type and pathogenicity was observed: the most invasive of the isolates are associated with RST1 and the least invasive with RST3 (Wang et al. 2001, Wang et al. 2002, Wormser et al. 1999). Comparative genome hybridization ...

ORGANISM(S): Borrelia burgdorferi

2006-08-15 | E-MEXP-735 | biostudies-arrayexpress

Down-regulation of ATF1 leads to early neuroectoderm differentiation of human embryonic stem cells by increasing the expression level of SOX2.

Not available

S-EPMC6704446 | biostudies-literature

Incidence and Outcomes of Patients With Oral Cavity Squamous Cell Carcinoma and Fourth Primary Tumors: A Long-term Follow-up Study in a Betel Quid Chewing Endemic Area.

Not available

S-EPMC4998365 | biostudies-literature

Triiodothyronine Treatment: Effects on vastus lateralis skeletal muscle

Healthy men received 75 5g/d of T3 for 14 days. Microbiopsies of vastus lateralis skeletal muscle were performed before and after the treatment. For microarray experiments, we used samples from five subjects. After amplification of total RNA (Wang et al. 2000a), fluorescently labeled cDNA was prepar...

ORGANISM(S): Homo sapiens

2005-10-18 | E-GEOD-3462 | biostudies-arrayexpress

Insulin receptor substrate-1 time-dependently regulates bone formation by controlling collagen Iα2 expression via miR-342.

Not available

S-EPMC5102111 | biostudies-literature

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