Wang Chang C - OmicsDI

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Unknown (4826)
Proteomics (163)
Transcriptomics (111)
Genomics (37)
Metabolomics (34)
Multiomics (7)
Models (1)

Organisms

Homo sapiens (127)
Mycobacterium tuberculosis SP7 (94)
Mus musculus (34)
Glycine max (9)
Solanum lycopersicum (5)
Arabidopsis thaliana (5)
Gallus gallus (4)
Saccharomyces cerevisiae (4)
Ursus americanus (2)
Rattus norvegicus (2)
Mus (2)
Trichinella spiralis (1)
Allium cepa (1)
Tetrahymena thermophila (1)
uncultured bacterium (1)
Bemisia tabaci (1)
Zea mays (1)
Oryza sativa (1)
Vitis vinifera (1)
Cordyceps militaris (1)
Cordyceps cicadae (1)
Mizuhopecten yessoensis (1)
Ophiocordyceps sinensis (1)
Mycolicibacterium smegmatis MC2 155 (1)
Bos taurus (1)
Oryctolagus cuniculus (1)
Ovis aries (1)
Rattus rattus (1)
Haemaphysalis longicornis (1)
Gossypium hirsutum (1)

Repository

biostudies-arrayexpress (116)
pride (94)
iProX (57)
MetaboLights (34)
EGA (32)
MassIVE (9)
PeptideAtlas (3)
BioModels (1)

Tissue

Cell culture (25)
Permanent cell line cell (8)
Epithelial cell (7)
Liver (7)
Leaf (6)
Testis (5)
Whole body (5)
Lung (5)
Others (3)
Heart (3)
B cell (3)
Somatic cell (2)
Fungal cell (2)
Diploid cell (2)
Plant cell (2)
Macrophage (2)
Brain (2)
Cell suspension culture (2)
Blood plasma (2)
Root (2)
Spleen (2)
Rosette (2)
Primary cell (2)
Kidney (2)
Blood cell (2)
Colon (2)
Blood (2)
Somatic muscle cell (1)
Ovary epithelium cell line (1)
Peritoneal cavity (1)

Disease

Parasitic infectious disease (3)
Lung adenocarcinoma (3)
Cervix carcinoma (3)
Disease free (3)
Acute leukemia (3)
Parasitic helminthiasis infectious disease (2)
Influenza (2)
Acute Myeloid Leukemia (1)
Carcinoma (1)
Uveitis (1)
Fungal infectious disease (1)
Ovarian cancer (1)
Diabetic retinopathy (1)
Severe acute respiratory syndrome (1)
Lymphoma (1)
Pancreatic ductal adenocarcinoma (1)
Lung cancer (1)
Cardiovascular system disease (1)
Brain cancer (1)
Malignant neoplasm of ovary (1)
Liver cancer (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (94)
Shotgun proteomics (34)
Mass spectrometry (32)
Bottom-up proteomics (28)
Data-dependent acquisition (13)
Affinity purification coupled with mass spectrometry proteomics (9)
SWATH MS (5)
Data-independent acquisition (5)
Gel-based experiment (5)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
Proteogenomics (2)
Affinity proteomics (2)
Immunopeptidomics (2)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina HiSeq 2000 (1)
MSE (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - reverse phase (11)
Liquid Chromatography MS - negative - reverse-phase (5)
Liquid Chromatography MS - positive - reverse-phase (4)
Illumina NovaSeq 6000 (3)
NextSeq 500 (3)
MS:1000031 (3)
LTQ Orbitrap Elite (3)
Liquid Chromatography MS - negative (3)
Liquid Chromatography MS - positive (3)
Liquid Chromatography MS - positive - hilic (3)
Illumina HiSeq 2000 (2)
Orbitrap Fusion Lumos (2)
Q Exactive (2)
Liquid Chromatography Tandem MS (LC-MS/MS) (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - negative - hilic (2)
FACS (1)
ND-1000 spectrophotometer (Nano-drop Technology) and Bioanalyzer 2100 (1)
Tabletop centrifuges (1)
Illumina Genome Analyzer IIx (1)
LTQ Orbitrap Velos (1)
Q Exactive HF-X (1)
Liquid Chromatography MS - negative - reversed-phase-c18 (1)
Liquid Chromatography MS - positive - reversed-phase-c18 (1)
Flow injection analysis MS - negative (1)
Flow injection analysis MS - positive (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
5975C Series GC/MSD (Agilent) (1)
MS Imaging - (1)

Publication Date

2025 (32)
2023 (28)
2014 (27)
2021 (21)
2012 (21)
2022 (21)
2013 (20)
2024 (16)
2026 (16)
2019 (15)
2020 (14)
2010 (12)
2016 (11)
2011 (9)
2015 (8)
2018 (8)
2008 (5)
2017 (2)
2009 (2)
2006 (2)
2005 (2)
2027 (1)

UNIPROT ID/AC

Q6ZVE7 (3)
Q99619 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q6MZQ0 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q02833 (3)
O43194 (3)
Q9Y2C3 (3)
O00338 (3)
Q6NSJ2 (3)
Q17R98 (3)
Q9Y664 (3)
Q9UNP4 (3)
Q96BZ9 (3)
Q8WUA8 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000247315 (3)
ENSG00000147251 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:17568 (12)
CHEBI:16708 (11)
CHEBI:7916 (11)
CHEBI:16704 (11)
CHEBI:17596 (11)
CHEBI:16335 (10)
CHEBI:17368 (10)
CHEBI:30769 (10)
CHEBI:16040 (9)
CHEBI:15741 (9)
CHEBI:17821 (9)
CHEBI:17154 (9)
CHEBI:37024 (9)
CHEBI:27468 (9)
CHEBI:17509 (9)
CHEBI:17750 (9)
CHEBI:18183 (9)
CHEBI:16737 (9)
CHEBI:16919 (9)
CHEBI:15354 (9)
CHEBI:15756 (9)
CHEBI:30805 (8)
CHEBI:17822 (8)
CHEBI:26271 (8)
CHEBI:17126 (8)
CHEBI:18295 (8)
CHEBI:17562 (8)
CHEBI:16750 (8)
CHEBI:17748 (8)
CHEBI:30832 (8)

Metabolite Name

Inosine (7)
Uracil (6)
Kynurenic acid (6)
Adenine (6)
Hypoxanthine (6)
Citric acid (5)
Adenosine (5)
Azelaic acid (5)
Uric acid (5)
Xanthine (5)
2'-deoxycytidine (4)
Leucine (4)
Rutin (4)
Ornithine (4)
Pantothenic acid (4)
Citraconic acid (4)
Lysine (4)
Threonine (4)
Riboflavin (4)
Proline (4)
Dihydrouracil (4)
Cytidine (4)
Guanosine (4)
Thymidine (4)
Uridine (4)
Creatinine (4)
Isorhamnetin (3)
Quercetin (3)
Agmatine (3)
Coenzyme A (3)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (58)
RNA-seq of coding RNA (22)
RNA-seq of non coding RNA (7)
ChIP-chip by tiling array (6)
Unknown experiment type (5)
ChIP-seq (4)
Other (3)
Plant - High-throughput sequencing (2)
Comparative genomic hybridization by array (2)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Bisulfite-seq (1)
ATAC-seq (1)
MicroRNA profiling by array (1)
DNA-seq (1)
Methylation profiling by array (1)

Release Date

2025 (641)
2022 (587)
2023 (577)
2024 (496)
2021 (490)
2020 (352)
2019 (292)
2018 (249)
2016 (234)
2015 (206)
2017 (183)
2014 (158)
2013 (102)
2012 (92)
2026 (78)
2011 (77)
2010 (50)
2008 (28)
2009 (21)
2005 (11)
2006 (6)
2007 (6)
2004 (3)
2003 (1)
2002 (1)
1997 (1)

Lab affiliation

Institute of Clinical Medicine in National Yang-Ming Chiao Tung University, Taiwan (Muh-Hwa Yang Lab) (3)
Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (3)
Beijing proteome research center (3)
Department of Cell and Molecular Biology, College of Medicine, Chang Gung University, Taoyuan, Taiwan (3)
Genomics Research Center, Academia Sinica, Taipei, 11529 Taiwan (3)
Ping Xu, Ph.D. Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, P.R. China. Tel: 0086-10-61777113, Fax: 0086-10-61777060 (2)
Institute of Biological Chemistry, Academia Sinica, Taipei, 115201, Taiwan Institute of Biochemical Sciences, National Taiwan University, Taipei, 106319, Taiwan International Institute for Sustainability with Knotted Chiral Meta Matter (SKCM2), Hiroshima University, Hiroshima, 739-8511, Japan (2)
Sichuan university (2)
Peking Union Medical College (2)
National Key Laboratory of Wheat and Maize Crop Science, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, China (1)
National Key Discipline Laboratory, Department of Nutrition and Food Hygiene, School of Public Health, Harbin Medical University, Harbin, P. R. China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan 430070, China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China 3.Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
State Key Laboratory of Proteomics; Beijing Proteome Research Center; National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics; China (1)
Institute (1)
Department of Integration of Chinese and Western Medicine, School of Basic Medicine Science, Peking University, China (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Chair of Proteomics and Biolanalytics, TUM School of Life Sciences, Technical University of Munich, Germany (1)
Department of Chemistry, Sun's Lab, Michigan State University, USA (1)
1Seer, Inc., Redwood City, CA 94065, USA; 4Center for Nanomedicine and Department of Anesthesiology, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA 02115, USA (1)
Univeristy of Notre Dame (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China. (1)
Department of Life Science, Institute of Molecular and Cellular Biology, National Taiwan University, Taipei, Taiwan. (1)
Department of Veterinary Biosciences, The University of Melbourne (1)
Department of Veterinary Biosciences, Melbourne Veterinary School, Faculty of Science, The University of Melbourne, Parkville, Victoria 3010, Australia (1)
Department of Plant Pathology, Entomology, and Microbiology. Iowa State University (1)
Institute of Biomedical Sciences, Academia Sinica (1)
Harold C. Simmons Comprehensive Cancer Center, UT Southwestern Medical Center, Dallas, TX, USA (1)

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Identification of Siglec-E-ligand candidates on BCL-1 mouse B cell line by proximity labeling

Siglec-E is a member of Siglec family of glycan recognition proteins involved in the regulation of myeloid cell activities. Siglec-E preferentially recognizes disialic acid, a glycan epitope consisting of two sialic acids conjugated in alpha2-8 linkage (Zhang JQ et al., Eur J Immunol. 2004, 34:1175...

ORGANISM(S): Mus musculus (Mouse)

2022-02-25 | PXD013032 | Pride