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ProteomicsProtein interaction network reveals the biofunctional difference between vegetative cell and heterocyst in multicellular cyanobacteria
Protein interaction network reveals the biofunctional difference between vegetative cell and heterocyst in multicellular cyanobacteria
ORGANISM(S): Nostoc Sp. Pcc 7120 = Fachb-418 
2022-04-26 | PXD025312 |
ProteomicsIdentification of microproteins in Hep3B cells at different cell cycle stages
Microproteins are generated from small open reading frames (sORFs) and turn out to play various vital biological functions. As an essential biological event of eukaryotic cells, the cell cycle is involved in cell replication and division. For such a highly regulated event, microproteins associated w...
ORGANISM(S): Homo Sapiens 
2021-12-09 | PXD030286 |
ProteomicsDynamic expression of intra-and extracellular proteome and the influence of epiphytic bacteria for Nostoc flagelliforme in response to rehydration
In the present work, we analyzed the intra-and extracellular proteome of N. flagelliforme over a complete rehydration period both in sterilization and natural condition for the first time.
ORGANISM(S): Cyanobacteria 
2019-12-23 | PXD016895 |
ProteomicsMapping microproteins and ncRNA-encoded polypeptides in different mouse tissues
Small open reading frame encoded peptides (SEPs), also called microproteins, play a vital role in biological processes. Plenty of their open reading frames are located on the non-coding RNA (ncRNA) range. Recent research has demonstrated that ncRNA-encoded polypeptides have essential functions and e...
ORGANISM(S): Mus Musculus 
2021-04-03 | PXD025158 |
ProteomicsIdentification of small open reading frames-encoded peptides in Saccharomyces cerevisiae under different stress conditions
Here we used mass spectrometry-based proteomics technology to explore SEPs with potential cellular stress function in Saccharomyces cerevisiae. Microproteins with unique peptides were identified under six culture conditions: normal, oxidation, starvation, UV radiation, heat shock, and heat shock wit...
ORGANISM(S): Saccharomyces Cerevisiae 
2022-06-07 | PXD028623 |
ProteomicsIdentification and analysis of small proteins and short open reading frame encoded peptides in Hep3B cell
The small proteins and short open reading frames encoded peptides (SEPs) are of fundamental importance because of their essential roles in biological processes. However, the annotation or identification of them is challenging, in part owing to the limitation of the traditional genome annotation pipe...
ORGANISM(S): Homo Sapiens 
2021-05-05 | PXD025813 |
ProteomicsIdentification and analysis of short open reading frame encoded peptides in different brain regions of mice
Here we used mass spectrometry-based proteomics technology to explore SEPs with potential function in five brain regions of the mouse. SEPs with unique peptides were identified in hippocampus, frontal cortex, temporal cortex, occipital cortex and parietal cortex.
ORGANISM(S): Mus Musculus 
2022-08-16 | PXD036064 |
ProteomicsInvestigation of the Dynamical Expression of Nostoc flagelliforme Proteome in Response to Rehydration
In this study, LC-MS/MS combined with isobaric chemical labeling technique (iTRAQ) was used to quantify dynamic changes of proteins in N. flagelliforme during the rehydration processes. Approximately 113 proteins were identified to be differentially expressed in photosynthesis, defense response, bios...
ORGANISM(S): Nostoc Flagelliforme Str. Sunitezuoqi 
2019-11-28 | PXD010464 |
ProteomicsGlobal Landscape of Native Protein Complexes in Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803 is a model organism for study photosynthesis, energy metabolism, and environmental stress. It was the first fully sequenced phototrophic organism, but still nearly half of its proteome without functional annotation. In this study, we obtained 291 protein complexes, includi...
ORGANISM(S): Synechocystis Sp. Pcc 6803 
2019-10-22 | PXD015948 |
MetabolomicsArtificial fermentation with trichome exudate improves microbial community composition and leaf quality in cigar tobacco
Diterpenoids and sucrose esters are synthesized in cigar tobacco leave (CTLs) trichomes and secreted onto leaf surface as trichome exudate (TE), contributing to sensory quality.To reveal the mechanism by which TE affects CTLs quality, this study employed the half-leaf method, utilizing tobacco extra...
2026-06-17 | MTBLS14776 | MetaboLights
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