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GenomicsGenome-wide DNA-binding profile of the Vibrio cholerae histone-like nucleoid structuring protein (H-NS)
The cholera disease bacterium V. cholerae, can adopt planktonic or biofilm lifestyles depending on the intracellular concentration of the second messenger cyclic diguanylic acid (c-di-GMP). Biofilm formation protects Vibrios from stressful conditions and facilitates disease transmission by enhancing...
ORGANISM(S): Vibrio cholerae 
2015-05-13 | E-GEOD-64249 | biostudies-arrayexpress
ProteomicsProteomic analysis of differential anther development from sterile/fertile lines in Capsicum annuum L.
Background: Pepper (Capsicum annuum L.) is a major cash crop throughout the world. Male sterility is an important characteristic in crop species that leads to a failure to produce functional pollen, and it has crucial roles in agricultural breeding and the utilization of heterosis. Objectives: In t...
ORGANISM(S): Capsicum annuum 
2022-05-19 | PXD031331 | Pride
Male sterility  proteomic parallel reaction monitoring (prm) phytohormone  pepper (capsicum annuum l.) 
TranscriptomicsRNA-seq Analysis Identifies New Genes Regulated by the Histone-like Nucleoid Structuring Protein (H-NS) Affecting Vibrio cholerae Virulence, Stress Response and Chemotaxis
Cholera is a diarrheal disease caused by Vibrio cholerae of serogroups O1 and O139 that affects impoverished populations worldwide. The histone-like nucleoid structuring protein (H-NS) is a global regulator of environmentally-regulated gene expression that plays a fundamental role in V. cholerae ada...
ORGANISM(S): Vibrio cholerae 
2015-02-16 | E-GEOD-62785 | biostudies-arrayexpress
UnknownA High-Fat-Diet-Induced Microbiota Imbalance Correlates with Oxidative Stress and the Inflammatory Response in the Gut of Freshwater Drum (Aplodinotus grunniens).
Not available
S-EPMC10967924 | biostudies-literature
MetabolomicsThe response of Chlamydomonas reinhardtii to nitrogen deprivation: a systems biology analysis

Drastic alteration in macronutrients causes large changes in gene expression in the photosynthetic unicellular alga Chlamydomonas reinhardtii. Preliminary data suggested that cells follow a biphasic response to this change hinging on the initiation of lipid accumulation, and we hypothesized that ...

2015-06-29 | MTBLS208 | MetaboLights
TranscriptomicsDevelopment of microRNA expression signatures for gastric cancer
To further investigate of microRNA expression profile of gastric cancer, we have employed whole microRNA gene chip as a discovery platform to identify gene differential expression between gastric cancer tissues with mormal gastric tissues.Expression of four microRNAs (miR-125b,miR-451,miR-192b,miR-2...
ORGANISM(S): Homo sapiens 
2011-01-15 | E-GEOD-26645 | biostudies-arrayexpress
ProteomicsAutoGP 2: an improved fully automated high-throughput system for simultaneously enriching and separating intact glycopeptides
An improved fully automated high-throughput system, named as AutoGP 2, for simultaneously enriching and separating intact glycopeptides has been developed in this study by introducing a second 10-port valve (valve 2) to the previously developed AutoGP system with only a 10-port valve (valve 1). Spec...
ORGANISM(S): Mus Musculus 
PXD069435 |
MetabolomicsComparative analysis of proteomic and metabolomic profiles of different species of Paris

An extract prepared from species of Paris is the most widely consumed herbal product in China. The genus Paris includes a variety of genotypes with different medicinal component contents but only two are defined as official sources. Closely related species have different medicinal properties beca...

2020-01-13 | MTBLS779 | MetaboLights
TranscriptomicsThe transcriptomes for primary panicle in four near-isogenic lines combined of different allele of two major grain length loci GS3 and qGL3 in rice
To investigate the genetic relationship between two major grain length loci GS3 and qGL3, we developed the near-isogenic lines (NILs), NIL-GS3 (GS3/qGL3), NIL-qgl3 (gs3/qgl3), NIL-GS3/qgl3 (GS3/qgl3) in the background of 93-11 (gs3/qGL3) by crossing and MAS approach. Four samples was analyzed: thre...
ORGANISM(S): Oryza sativa 
2014-07-22 | E-GEOD-59619 | biostudies-arrayexpress
ProteomicsProteins in the kidney of mice infected by Babesia microti
The dynamic changes of all proteins in the kidney of mice infected with Babesia were studied by using dia quantitative proteomics technology, and the regulation strategy of proteins in the kidney of mice infected with Babesia was discussed.
ORGANISM(S): Mus Musculus 
2021-01-27 | PXD023863 |
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