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ProteomicsVerticillium dahliae Frq and Frh form a Frq-Frh complex in dependence on arginine 806 (R806) of Frh
The plant pathogenic fungus Verticillium dahliae has homologs of the clock genes [Cascant-Lopez et al., 2020], which are well described in Neurospora crassa [Diernfellner et al., 2020]. In N. crassa, frequency (Frq) and the Frq-interacting RNA helicase (Frh) interact and form the Frq-Frh complex [Ch...
ORGANISM(S): Verticillium dahliae JR2 
2023-07-12 | PXD041716 | Pride
Frh Clock proteins Frq-interacting rna helicase Frq Verticillium dahliae jr2 Frequency 
TranscriptomicsTranscriptional Analysis of 1M Regions in Glycine max Using Tiling Microarrays
We report here a transcriptonal analysis in six different organ types of a approximately 1 Mb region in soybean (Glycine max) which is sytenic with legume (Medicago truncatula). We used oligonucleotide tiling microarrays to detecte transcription of over 80% of the predicted genes in both species. We...
ORGANISM(S): Glycine max 
2010-05-26 | E-GEOD-10056 | biostudies-arrayexpress
TranscriptomicsTranscriptional Analysis of 1M Regions in Medicago truncatula Using Tiling Microarrays
We report here a transcriptonal analysis in six different organ types of a approximately 1 Mb region in legume plants barrel medic (Medicago truncatula) which is sytenic with soybean (Glycine max). We used oligonucleotide tiling microarrays to detecte transcription of over 80% of the predicted genes...
ORGANISM(S): Medicago truncatula 
2010-05-26 | E-GEOD-10055 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human MCF7 breast cancer cell line treated with dioxin and DMSO control
MCF7 cells were treated with DMSO or 100 nM Dioxin for 16 hr. Gene expression changes were quantified by microarray analyses. Experiment Overall Design: HU133A and B arrays were used to quantify differences in RNA after treatment with 100 nM dioxin for 16 h. The experiment was repeated 3 times.
ORGANISM(S): Homo sapiens 
2007-10-31 | E-GEOD-7765 | biostudies-arrayexpress
MetabolomicsEffects of Centella asiatica extract on antioxidant status and liver metabolome of rotenone-treated rats using GC-MS
The standardized extract of Centella asiatica (ECa233) contains >80% triterpenoids with a ratio of madecassoside to asiaticoside of 1.5(±0.5):1. Hepatoprotective effect of ECa233 has not yet been reported. The aim of this study was to examine the effect of ECa233 on liver metabolome of rotenone-trea...
2018-10-11 | MTBLS522 | MetaboLights
UnknownIntegration of Untargeted Metabolomics with Transcriptomics Provides Insights into Beauvericin Biosynthesis in Cordyceps chanhua under H2O2-Induced Oxidative Stress.
Not available
S-EPMC9143143 | biostudies-literature
TranscriptomicsA genome-wide longitudinal transcriptome analysis of the aging model Podospora anserina
Aging of biological systems is controlled by various processes which have a potential impact on gene expression. Here we report a genome-wide transcriptome analysis of the fungal aging model Podospora anserina. Total RNA of three individuals of defined age were pooled and analyzed by SuperSAGE (seri...
ORGANISM(S): Podospora anserina 
2013-12-20 | E-MTAB-2016 | biostudies-arrayexpress
UnknownEpidemiological distribution of genotypes of Giardia duodenalis in humans in Spain.
Not available
S-EPMC6728964 | biostudies-literature
TranscriptomicsBerry skin development in Norton grape: Distinct patterns of transcriptional regulation and flavonoid biosynthesis
Background: The complex and dynamic changes during grape berry development have been studied in Vitis vinifera, but little is known about these processes in other Vitis species. The grape variety ‘Norton’, with a major portion of its genome derived from Vitis aestivalis, maintains high levels of...
ORGANISM(S): Vitis sp. cv. 'Norton' 
2010-10-08 | E-GEOD-24561 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse adult and juvenile dura mater (bone) to explore the reossification of large calvarial defects during development
BACKGROUND: Although reossification of large calvarial defects is possible in children, adults lack this tissue engineering capacity. In this study, the authors compared the differences in gene expression between juvenile and adult dura mater using a mouse cDNA microarray with 42,000 unique elements...
ORGANISM(S): Mus musculus 
2006-11-06 | E-SMDB-3845 | biostudies-arrayexpress
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