Wang Pan P - OmicsDI

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Unknown (5640)
Proteomics (208)
Transcriptomics (139)
Metabolomics (93)
Genomics (31)

Organisms

Homo sapiens (188)
Mus musculus (82)
Oryza sativa (10)
Danio rerio (7)
Rattus norvegicus (7)
Ovis aries (3)
Saccharomyces cerevisiae (3)
Setaria italica (3)
Viruses (2)
Cucumis sativus (2)
Aggregatibacter actinomycetemcomitans (2)
Pan troglodytes (2)
Zea mays (2)
Jatropha curcas (1)
Bos grunniens (1)
Brassica oleracea (1)
Bovine viral diarrhea virus 1 (1)
Capra hircus (1)
Vaccinia virus Lister (1)
Bemisia tabaci (1)
Macaca mulatta (1)
Brassica napus (1)
Panonychus citri (1)
Columba livia (1)
Nicotiana tabacum (1)
Bos taurus (1)
Caenorhabditis elegans (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Sus scrofa (1)
Drosophila melanogaster (1)

Repository

biostudies-arrayexpress (164)
pride (128)
MetaboLights (92)
iProX (49)
PeptideAtlas (16)
jPOST (8)
EGA (6)
MassIVE (6)
GNPS (1)
PanoramaPublic (1)

Tissue

Cell culture (34)
Brain (12)
Liver (8)
Epithelial cell (6)
Heart (6)
Lung (6)
Skin (5)
Blood serum (4)
B cell (3)
Colon (3)
Kidney (3)
Lymph node (3)
Macrophage (3)
Permanent cell line cell (3)
Stem cell (3)
T cell (3)
Testis (3)
Whole body (3)
Bone marrow (2)
Chondrocyte (2)
Embryonic stem cell (2)
Esophagus (2)
Hepatocyte (2)
Keratinocyte (2)
Kidney cell line (2)
Leaf (2)
Leukocyte (2)
Muscle (2)
Ovary (2)
Pancreas (2)

Disease

Acute leukemia (4)
Disease free (3)
Wounds and Injuries (3)
Brain glioblastoma multiforme (2)
Breast cancer (2)
Colon cancer (2)
Melanoma (2)
Normal (1)
Acute myocardial infarction (1)
Brain cancer (1)
Brain disease (1)
COVID-19 (1)
Castration-resistant prostate carcinoma (1)
Cervix carcinoma (1)
Childhood extraosseous osteosarcoma (1)
Cholangiocarcinoma (1)
Chronic bronchitis (1)
Embryonal rhabdomyosarcoma (1)
Fibrolamellar carcinoma (1)
Fibrosarcoma (1)
Gastric body carcinoma (1)
Head and neck cancer (1)
Influenza (1)
Limb-girdle muscular dystrophy (1)
Lung carcinoma (1)
Lymphoma (1)
Malignant mesothelioma (1)
Malignant neoplasm of ovary (1)
Myeloproliferative neoplasm (1)
Wilson disease (1)

Technology Type

Mass Spectrometry (128)
Shotgun proteomics (61)
Mass spectrometry (49)
Mass spectrometry assay (42)
Bottom-up proteomics (21)
Affinity purification coupled with mass spectrometry proteomics (16)
Data-dependent acquisition (13)
Gel-based experiment (10)
SWATH MS (9)
Data-independent acquisition (7)
Proteogenomics (3)
NMR spectroscopy (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Immunopeptidomics (1)
Metaproteomics (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (12)
NextSeq 500 (3)
Orbitrap Fusion Lumos (3)
Q Exactive Plus (3)
Illumina NovaSeq X (2)
Illumina HiSeq 2000 (2)
Illumina HiSeq 3000 (2)
NEBNext rRNA Depletion Kit v2 and NEBNext Ultra II Directional RNA Library Prep Kit Illumina kits (1)
BD FACSAria™ III (1)
STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1 (1)
Illumina Nextera XT index kits (Set A–D) (1)
Oligo(dT) primer and SuperScript II reverse transcriptase (ThermoFisher Scientific), TapeStation 4200 or 2100 Bioanalyzer with a DNA High Sensitivity chip (Agilent Biotechnologies) (1)
Aria III (BD Biosciences) (1)
Analyses performed on a Linux HPC cluster with Intel Xeon CPUs (1)
Agilent 4200 TapeStation; PCR thermal cycler (Applied Biosystems) (1)
Qubit Fluorometer 3.0 (Thermo Fisher Scientific, USA); Agilent 4200 TapeStation (Agilent Technologies, USA) (1)
S1000 Thermal Cycler (BioRad) (1)
SeekOne® Digital Droplet System (Seek Gene) (1)
BD FACSAria III cell sorter (BD Biosciences) (1)
TBS380 (1)
Nanodrop2000 (1)
Agilent Bioanalyzer (1)
Not applicable (1)
ScanArray 4000 [PerkinElmer] (1)
NA (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1000 (1)
HiSeq X Ten (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)

Publication Date

2026 (66)
2025 (57)
2024 (47)
2023 (39)
2014 (36)
2022 (36)
2021 (34)
2010 (32)
2013 (25)
2015 (21)
2011 (17)
2020 (13)
2019 (11)
2012 (8)
2016 (6)
2009 (5)
2006 (4)
2018 (3)
2017 (2)
2008 (1)
2007 (1)
2004 (1)

UNIPROT ID/AC

A2AWE1 (16)
A2BGX6 (16)
A2BHA3 (16)
A2BIR3 (16)
A2CE51 (16)
A2CEZ0 (16)
A3KPR4 (16)
A8E7G6 (16)
A8KBJ5 (16)
B0R189 (16)
B0S730 (16)
B0UXS6 (16)
B0UYN4 (16)
B3DFP9 (16)
B3DFS9 (16)
B8A516 (16)
B8JIS1 (16)
B8JJ23 (16)
B8JKN6 (16)
B8JLJ3 (16)
B8JLS3 (16)
D1GJ56 (16)
E7EXF4 (16)
E7EYX7 (16)
E7EZ16 (16)
E7EZL7 (16)
E7F354 (16)
E7FBA5 (16)
E7FC32 (16)
E7FCI8 (16)

ENSEMBL ID

ENSDARG00000000103 (16)
ENSDARG00000001431 (16)
ENSDARG00000001915 (16)
ENSDARG00000001950 (16)
ENSDARG00000001993 (16)
ENSDARG00000002480 (16)
ENSDARG00000005039 (16)
ENSDARG00000005560 (16)
ENSDARG00000005791 (16)
ENSDARG00000006399 (16)
ENSDARG00000007219 (16)
ENSDARG00000009285 (16)
ENSDARG00000009484 (16)
ENSDARG00000010149 (16)
ENSDARG00000010478 (16)
ENSDARG00000013078 (16)
ENSDARG00000016301 (16)
ENSDARG00000016393 (16)
ENSDARG00000017014 (16)
ENSDARG00000017624 (16)
ENSDARG00000018404 (16)
ENSDARG00000020008 (16)
ENSDARG00000021124 (16)
ENSDARG00000022767 (16)
ENSDARG00000023323 (16)
ENSDARG00000024746 (16)
ENSDARG00000025012 (16)
ENSDARG00000025301 (16)
ENSDARG00000025350 (16)
ENSDARG00000025635 (16)

CHEBI ID

CHEBI:17368 (26)
CHEBI:17596 (24)
CHEBI:16335 (23)
CHEBI:16704 (23)
CHEBI:16919 (23)
CHEBI:15891 (22)
CHEBI:17568 (22)
CHEBI:16708 (21)
CHEBI:16235 (20)
CHEBI:16750 (20)
CHEBI:17295 (20)
CHEBI:17562 (20)
CHEBI:16015 (18)
CHEBI:16467 (18)
CHEBI:30915 (18)
CHEBI:35581 (18)
CHEBI:16393 (17)
CHEBI:17509 (17)
CHEBI:30769 (17)
CHEBI:55328 (17)
CHEBI:15756 (16)
CHEBI:15971 (16)
CHEBI:16347 (16)
CHEBI:16566 (16)
CHEBI:16737 (16)
CHEBI:17015 (16)
CHEBI:17154 (16)
CHEBI:17533 (16)
CHEBI:17687 (16)
CHEBI:32816 (16)

Metabolite Name

Hypoxanthine (31)
Adenosine (29)
Creatine (29)
Cytosine (25)
Inosine (25)
Taurine (25)
Uridine (25)
Adenine (24)
Cytidine (23)
Guanosine (23)
Xanthine (23)
Betaine (22)
Choline (21)
Guanine (21)
L-Phenylalanine (21)
L-Tryptophan (21)
L-Tyrosine (21)
Creatinine (20)
Indole (20)
Pantothenic acid (20)
L-Arginine (19)
Oleamide (19)
Uracil (19)
Riboflavin (18)
Azelaic acid (17)
Genistein (17)
Histamine (17)
L-Glutamine (17)
L-Histidine (17)
Ornithine (17)

Study type

Transcription profiling by array (76)
RNA-seq of coding RNA (26)
ChIP-seq (23)
Other (9)
ChIP-chip by tiling array (5)
RNA-seq of total RNA (4)
Comparative genomic hybridization by array (3)
Cell line - High-throughput sequencing (2)
Transcription profiling by RT-PCR (2)
RNA-seq of coding RNA from single cells (2)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
Human - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
ChIP-chip by array (1)
Spatial transcriptomics by high-throughput sequencing (1)
Hi-C (1)
RIP-seq (1)
Ribo-seq (1)
Methylation profiling by array (1)
CUT&RUN (1)

Release Date

2025 (941)
2022 (781)
2024 (750)
2023 (736)
2021 (612)
2020 (410)
2019 (283)
2017 (219)
2018 (213)
2015 (168)
2016 (165)
2014 (130)
2026 (124)
2013 (82)
2012 (60)
2011 (42)
2010 (42)
2009 (25)
2008 (7)
2006 (4)
2007 (3)
2005 (2)
2002 (2)
2004 (1)
2003 (1)
2001 (1)

Lab affiliation

Department of Orthopedic Surgery, Sir Run Run Shaw Hospital, Medical College of Zhejiang University, Hangzhou City, China. (3)
Department of Clinical Laboratory, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (2)
Department of Immunology, Interfaculty Institute for Cell Biology, Eberhard Karls University Tübingen (2)
Institute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, 210042 Nanjing, China. (2)
Johns Hopkins University (2)
Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences (2)
Zhejiang University (2)
(1) Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium; (2) VIB Center for Plant Systems Biology, B-9052 Ghent, Belgium. (1)
-Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht -Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, Netherlands. -Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, Netherlands. (1)
., Department of Laboratory Medicine, Medical University of Vienna, 18-20 Währinger Gürtel, 1090 Vienna, Austria (1)
1 Department of Computer Science, Hanyang University, Seoul 04763, Republic of Korea 2 Institute for Artificial Intelligence Research, Hanyang University, Seoul 04763, Republic of Korea (1)
1State Key Laboratory of Digital Medical Engineering, Department of Otolaryngology Head and Neck Surgery, Zhongda Hospital, School of Life Sciences and Technology, School of Medicine, Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University, Nanjing 210096, China.2 Co-Innovation Center of Neuroregeneration, Nantong University, Nantong 226001, China. (1)
Acupuncture and Tuina School/Third Teaching Hospital, Chengdu University of Traditional Chinese Medicine (1)
Anonymity for double-blind review (1)
Biobank of Nanjing Women and Children's Healthcare Hospital, Women's Hospital of Nanjing Medical University( Nanjing Women and Children's Healthcare Hospital), Nanjing 210004, China (1)
Bioscience Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Kingdom of Saudi Arabia (1)
Biotechnology Research Center, Shandong Academy of Agricultural Sciences; Key Laboratory of Genetic Improvement, Ecology and Physiology of Crops, Jinan 250100, Shandong, China (1)
Brain Injury Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University; Shanghai Institute of Head Trauma, Shanghai, China, 200127. (1)
CAS Key Laboratory of Separation Sciences for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China (1)
Cell and Chemical Biology Leiden University Medical Center the Netherlands (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
Center for Excellence in Molecular Cell Science, CAS (1)
Changhai Hospital, Naval Medical University (1)
Chengdu University of Traditional Chinese Medicine (1)
Children's Hospital of Soochow University, Suzhou (1)
China Agricultural University (1)
Chinese Academy of Sciences Shanghai Institute of Materia Medica (1)
College of Pharmacy, Anhui University of Chinese Medicine, Hefei 230012, China (1)
College of Pharmacy, Jinan University, Guangzhou, China (1)
College of Pharmceutial Science, Zhejiang University of Technology (1)

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Needle Adjustment Free (NAF) running suture technique (PAN suture) in laparoscopic partial nephrectomy.

Not available

S-EPMC7937216 | biostudies-literature

P. aeruginosa proteomics under the compound 7

We used the compond 7 developped by Jianwei Chen's group in P. aeruginosa under different concentrations (blank, 8*MIC and 16*MIC). Then we conducted the differential proteomics testing.

ORGANISM(S): Pseudomonas aeruginosa PAO1

2026-01-17 | PXD069942 | Pride

Deduced Conservation Strategy of the Macaques in China from their Evolutionary Development.

Not available

S-EPMC11659817 | biostudies-literature

Construction of Orthogonal Modular Proteinaceous Nanovaccine Delivery Vectors Based on mSA-Biotin Binding.

Not available

S-EPMC8911943 | biostudies-literature

Changes in gene expression induced by CDK9 inhibition alone and in combination with fludarabine

Using a transcriptomics approach we explored the mechanism(s) of synergy observed between CDKI-73 and fludarabine in primary CLL cells. The cytotoxic effects of CDKI-73 were associated with transcriptional inhibition of cdk9 target genes including MCL1 and XIAP. In contrast, fludarabine induced the ...

ORGANISM(S): Homo sapiens

2013-06-25 | E-GEOD-48258 | biostudies-arrayexpress

Proteomics of P.aeruginosa with compound 7

We have conducted proteomics of P. aeruginosa with and without compound 7 which was developped by Chen's group.

ORGANISM(S): Pseudomonas aeruginosa PAO1

2026-01-17 | PXD070105 | Pride

Compound 7 Proteomics P. aeruginosa

Development of a pan-Babesia FRET-qPCR and a survey of livestock from five Caribbean islands.

Not available

S-EPMC4588467 | biostudies-literature

Role and mechanism of alpa1-antitrypsin in polycystic ovary syndrome.

Not available