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TranscriptomicsTranscriptome Analysis of Rice Root Heterosis by RNA-Seq
Heterosis is a phenomenon that hybrids exhibit superior performance relative to the parental phenotypes. However, most studies focused on aboveground agronomic traits. Thus, systematic investigation on root heterosis, particularly at reproductive stage in rice is needed to be carried out. The recent...
ORGANISM(S): Oryza sativa 
2013-08-19 | E-GEOD-41797 | biostudies-arrayexpress
TranscriptomicsIdentification of transcriptome SNPs for assessing allele specific gene expression within a super-hybrid rice Xieyou9308
We identified 9325 reliable single nucleotide polymorphisms (SNPs) distributed throughout the genome, of which nearly 68% were represented in R9308 versus Xieqingzao B by CT and GA SNPs. This may indicate that DNA methylation, a heritable epigenetic mark, exists in the parents and their F1 hybrid. O...
ORGANISM(S): Oryza sativa 
2014-05-16 | E-GEOD-43727 | biostudies-arrayexpress
TranscriptomicsHuman mesenchymal stem cells at 24 hours and 0.5% O2, gene expression and exon array, three independent biological replicates
Multipotent bone marrow-derived mesenchymal stem cells (MSCs) represent a promising cell source for autologous transplantation in many human diseases. To better realize their in vivo therapeutic potential, hypoxia preconditioning has become a novel strategy to improve the survival, migration, and an...
ORGANISM(S): Homo sapiens 
2011-11-11 | E-GEOD-32006 | biostudies-arrayexpress
ProteomicsLabel-free Quantitative Proteomics Identifies Novel Plasma Biomarkers for Distinguishing Pulmonary Tuberculosis and Latent Infection
Lack of effective differential diagnostic methods between active tuberculosis (TB) and latent infection (LTBI) is still an obstacle for TB control. Furthermore, the molecular mechanism behind the progression from LTBI to active TB has been not elucidated until now. Therefore, we performed label-free...
ORGANISM(S): Homo Sapiens 
2024-09-20 | PXD056149 |
ProteomicsThe in-depth plasma proteomics of Diffuse large B-cell lymphoma
This dataset containing 147 DLBCL patients and 79 healthy controls. The proteomics was detected by our in-depth platform combining DIA-MS and antibody array. The datasets we uploaded were quantile normalized.
ORGANISM(S): Homo Sapiens 
2023-06-09 | PXD036842 |
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