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TranscriptomicsGenome-wide expression of transcriptomes under waterlogging stress condition in subtropical maize
Genome-wide transcriptome analysis was performed to understand the expression pattern of transcriptomes in tolerant and susceptible subtropical maize genotypes under waterlogging stress condition. Waterlogging stress causes yield reduction in maize (Zea mays). It is important to dissect the genetic...
ORGANISM(S): Zea mays 
2013-08-14 | E-GEOD-43088 | biostudies-arrayexpress
ProteomicsComparative proteomic analysis of grape in response to waterlogging stress
In this study, the proteomic responses of grape rootstock SO4 contrasting in different waterlogging tolerance were comparatively assayed. Using the tandem mass tags (TMT) labeling method, a total of 5578 grape proteins were identified.
ORGANISM(S): Vitis vinifera (Grape) 
2021-11-03 | PXD027839 | Pride
Waterlogging Grape Lc-ms/ms 
TranscriptomicsGlobal gene expression analysis of waterlogging stressed Cotton root and leaf tissue
Global gene expression was compared between roots of cotton plants (variety Sicot 71) flooded for 4 hours and roots of unflooded cotton plants. Global gene expression was also compared between leaves of cotton plants (variety Sicot 71) flooded for 24 hours and leaves of unflooded cotton plants. Wate...
ORGANISM(S): Gossypium hirsutum 
2010-05-17 | E-GEOD-16467 | biostudies-arrayexpress
ProteomicsPeanut Root Waterlogging LC-MSMS
The project analyzed quantitative proteomics in two peanut cultivars under waterlogging stress, and identified differentially accumulated proteins (DAPs) as well as protein-protein interactions (PPI) between two cultivars with different waterlogging tolerance.
ORGANISM(S): Arachis hypogaea (Peanut) 
2021-07-28 | PXD027176 | Pride
Lc-msms Peanut Waterlogging Dia Root 
TranscriptomicsTranscriptome profiling from roots of jatropha in response to waterlogging
Gene expression analysis by high-throughtput RNA-sequencing from roots of waterlogged jatropha (Jatropha curcas). Six leaf stage seedlings (~30 d.o.) were subjected to 24 h of soil waterlogging. 4 samples, 2 conditions (24 h nonstress and 24 h waterlogging stress) and 2 independent biological repli...
ORGANISM(S): Jatropha curcas 
2014-11-05 | E-GEOD-57428 | biostudies-arrayexpress
ProteomicsiTRAQ-based quantitative proteomics of eggplant root treated with waterlogging stress
Cultivated eggplant XN, a waterlogging-tolerant variety, were treated with waterlogging stress, and the root of XN eggplant were harvested at the time point of 0, 6, 12, and 24 h post treatment ,relatively. iTRAQ-based quantitative proteomics was performed to analyze protein dynamics in eggplant roo...
ORGANISM(S): Solanum melongena 
2023-07-20 | PXD041747 | Pride
Eggplant Solanum melongena Proteomics Waterlogging stress Itraq 
TranscriptomicsCharacterization of miRNA expression in response to short-term waterlogging in Maize roots
Waterlogging of plants leads to low oxygen levels (hypoxia) in the roots and causes a metabolic switch from aerobic respiration to anaerobic fermentation that results in rapid changes in gene transcription and protein synthesis. Our research seeks to characterize the gene regulatory networks associa...
ORGANISM(S): Zea mays 
2011-10-15 | E-GEOD-32983 | biostudies-arrayexpress
ProteomicsSoybena response to waterlogging
Leaf is sensitive to environmental changes and exhibits specific responses to abiotic stress. To identify the response mechanism in soybean leaf under waterlogging stress, a gel-free/label-free proteomic technique combined with polyethylene glycol fractionation was used.
ORGANISM(S): Glycine max 
2017-07-04 | PXD005933 | Pride
Waterlogging. Soybean Gel-free/label-free proteomics Leaf Time dependency 
TranscriptomicsRNA-seq of soybean treated waterlogging condition
Plants of soybean (Glycine max L.) cv. Daewonkong were grown until they reached the V2 stage and treated waterlogging stress, the water level to submerge the soil was maintained for 10 days, followed by a recovery time of 15 days.
ORGANISM(S): Glycine max 
2026-05-24 | E-MTAB-14196 | biostudies-arrayexpress
ProteomicsComparative Transcriptome Combined with Proteome Analyses Revealed Key Factors Involved in Alfalfa (Medicago sativa) Response to Waterlogging Stress
Alfalfa (Medicago sativa) is the most widely grown and most important forage crop in the world. However, alfalfa is susceptible to waterlogging stress, which is the major constraint for its cultivation area and crop production. So far, the molecular mechanism of alfalfa response to the waterlogging ...
ORGANISM(S): Medicago sativa (Alfalfa) 
2019-11-11 | PXD013025 | Pride
Waterlogging Molecular mechanism Transcriptome Proteome Alfalfa 
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