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ProteomicsModelling glycan processing reveals Golgi-enzyme homeostasis upon trafficking defects and cellular differentiation
Description: These date form the basis for supplementary table 2 and supplementary figure 6 of the manuscript "Modelling glycan processing reveals Golgi-enzyme homeostasis upon trafficking defects and cellular differentiation" by P Fisher, H Spencer, J Thomas-Oates, AJ Wood, D Ungar in Cell Reports
ORGANISM(S): Homo sapiens (Human) 
2019-11-11 | PXD013211 | Pride
Mscs Glycan processing Markov chain monte carlo Mass spectrometry Cog complex Golgi apparatus 
MetabolomicsExamining the effects of cigarette smoke on mouse lens through a multi OMIC approach
Here, we report a multi OMIC (transcriptome, proteome, and metabolome) approach to investigate molecular changes in lens fiber cells (FC) of mice exposed to cigarette smoke (CS). Pregnant mice were placed in a whole-body smoke chamber and a few days later pups were born, which were exposed to CS for...
2024-03-24 | MTBLS207 | MetaboLights
UnknownA database of marine phytoplankton abundance, biomass and species composition in Australian waters.
Not available
S-EPMC4915276 | biostudies-literature
UnknownA database of chlorophyll a in Australian waters.
Not available
S-EPMC5819481 | biostudies-literature
UnknownA database of zooplankton biomass in Australian marine waters.
Not available
S-EPMC7478976 | biostudies-literature
MetabolomicsDifferential role of sphingomyelin in influenza virus, rhinovirus and SARS-CoV-2 infection of Calu-3 cells
Host cell lipids play a pivotal role in the pathogenesis of respiratory virus infection. However, a direct comparison of the lipidomic profile of influenza virus and rhinovirus infections is lacking. In this study, we first compared the lipid profile of influenza virus and rhinovirus infection in a ...
2022-11-15 | MTBLS2352 | MetaboLights
UnknownAdvancing DNA Barcoding to Elucidate Elasmobranch Biodiversity in Malaysian Waters.
Not available
S-EPMC10044685 | biostudies-literature
ProteomicsStrain-specific peptide (SSP) standard: A genetically encoded quality control standard for isobaric tagging strategies
Isobaric tag-based sample multiplexing strategies are extensively used for global protein abundance profiling. However, such analyses are often confounded by ratio compression resulting from the co-isolation, co-fragmentation, and co-quantification of co-eluting peptides, termed “interference.” Rece...
ORGANISM(S): Mus musculus (Mouse) 
2021-04-03 | PXD023203 | Pride
Tmtpro16 Faims Eclipse Rts-ms3 Sps-ms3 Founder strains 
UnknownIncreased yield of full GBA sequencing in Ashkenazi Jews with Parkinson's disease.
Not available
S-EPMC6261782 | biostudies-literature
MetabolomicsSoftware tool for internal standard based normalization of lipids, and effect of data-processing strategies on resulting values

BACKGROUND: Lipidomics, the comprehensive measurement of lipids within a biological system or substrate, is an emerging field with significant potential for improving clinical diagnosis and our understanding of health and disease. While lipids diverse biological roles contribute ...

2022-05-17 | MTBLS710 | MetaboLights
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