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MetabolomicsDistinct lipid signatures are identified in the plasma of rats with chronic inflammation induced by estradiol benzoate and sex hormones

INTRODUCTION: Prostatitis is likely to occur in younger or middle-aged men, while prostate cancer is likely to occur in older men. Although amino acids and lipids as biomarkers of prostate cancer have been examined using prostate cancer cell lines/tissues, no previous studies hav...

2020-11-04 | MTBLS2028 | MetaboLights
ProteomicsSoybean Symbiosome Membrane Proteome
Symbiosome membranes (SM) and symbiosome space (SS) fractions were isolated from nitrogen fixing soybean root nodules and analyzed using non-gel proteomic techniques. Bicarbonate stripping and chloroform-methanol extraction of isolated SM were used to enrich for hydrophobic integral membrane protein...
ORGANISM(S): Glycine max 
2015-08-12 | PXD001132 | Pride
Soybean Symbiosome Legume Membrane 
TranscriptomicsNegative energy balance and hepatic gene expression patterns in high yielding dairy cows during the early postpartum period [liver]
In high yielding dairy cows the liver undergoes extensive physiological and biochemical changes during the early postpartum period in an effort to re-establish metabolic homeostasis and to counteract the adverse effects of negative energy balance (NEB). These adaptations are likely to be mediated by...
ORGANISM(S): Bos taurus 
2014-04-08 | E-GEOD-56547 | biostudies-arrayexpress
TranscriptomicsAnalysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarray
The fraction of dissolved dimethylsulfoniopropionate (DMSPd) converted by marine bacterioplankton into the climate-active gas dimethylsulfide (DMS) varies widely in the ocean, with the factors that determine this value still largely unknown. One current hypothesis is that the ratio of DMS formation:...
ORGANISM(S): marine metagenome 
2010-08-05 | E-GEOD-21325 | biostudies-arrayexpress
TranscriptomicsDiatom transcriptomics under nitrate limitation
Here, we examined the ramifications of between-species diversity by documenting the transcriptional response of three marine diatoms - Thalassiosira pseudonana, Fragilariopsis cylindrus, and Pseudo-nitzschia multiseries - to the onset of nitrate limitation of growth, a common limiting nutrient in th...
ORGANISM(S): Thalassiosira pseudonana 
2014-03-25 | E-GEOD-56132 | biostudies-arrayexpress
TranscriptomicsNegative energy balance and splenic gene expression patterns in high yielding dairy cows during the early postpartum period [spleen]
Increased energy demands to support lactation, coupled with lowered feed intake capacity results in negative energy balance (NEB) and is typically characterized by extensive mobilization of body energy reserves in the early postpartum dairy cow. The catabolism of stored lipid leads to an increase i...
ORGANISM(S): Bos taurus 
2014-04-08 | E-GEOD-56589 | biostudies-arrayexpress
ProteomicsIdentification of novel glycan modification on S-layer protein from Methanoculleus Marisnigri
Mass spectrometry and NMR were used to characterize the N- and O-glycan modifications expressed by Methanoculleus marisnigri, a mesophilic methanogen from the Order Methanomicrobiales. The S-layer protein was identified as a PGF-CTERM sorting domain-containing protein encoded by MEMAR_RS02690 and is...
ORGANISM(S): Methanoculleus marisnigri JR1 Archaea 
2023-03-23 | PXD030331 | Pride
O-glycosylation S-layer protein Archaea N-glycosylation Post-translational modification 
MetabolomicsWax ester and lipophilic compound profiling of Euglena gracilis by gas chromatography-mass spectrometry: toward understanding of wax ester fermentation under hypoxia
Lipids are being increasingly used as biodiesel feedstock, and several saturated wax esters from Euglena gracilis are candidates for outdoor bulk production. Wax ester fermentation in Euglena is strongly increased by hypoxia, but key events underlying the metabolic shift toward wax ester biosynthesi...
2014-09-04 | MTBLS113 | MetaboLights
TranscriptomicsGENOMIC AND PHENOTYPIC RESPONSE OF HORNYHEAD TURBOT EXPOSED TO MUNICIPAL WASTEWATER EFFLUENTS
Laboratory tests with marine flatfish were conducted to investigate associations among gene expression, higher biological responses and wastewater effluent exposure. Previous studies showed molecular responses such as elevated concentrations of plasma estradiol and vitellogenin in wild male hornyhe...
ORGANISM(S): Pleuronichthys verticalis 
2013-12-10 | E-MEXP-3851 | biostudies-arrayexpress
TranscriptomicsMolecular analysis of endocrine disruption in hornyhead turbot captured from wastewater treatment plant discharge locations in Southern California
Hornyhead turbot (Pleuronichthys verticalis) captured near sewage outfalls are used as sentinel fish for monitoring exposure to industrial and agricultural chemicals of ~20 million people living in coastal southern California. Although analyses of hormones in blood and organ morphology and histology...
ORGANISM(S): Pleuronichthys verticalis 
2013-12-10 | E-MEXP-3852 | biostudies-arrayexpress
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