Wei Yu Y - OmicsDI

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Unknown (3375)
Proteomics (182)
Transcriptomics (32)
Genomics (26)
Metabolomics (20)
Multiomics (6)
Models (1)

Organisms

Homo sapiens (114)
Schizophyllum commune H4-8 (50)
Mycobacterium tuberculosis SP7 (50)
Mus musculus (30)
Zea mays (4)
Rattus norvegicus (4)
Severe acute respiratory syndrome coronavirus 2 (4)
Oryza sativa (3)
Gossypium hirsutum (2)
Triticum aestivum (2)
Grapholita molesta (2)
Pseudomonas aeruginosa PAO1 (2)
Arabidopsis thaliana (2)
Oryza rufipogon (1)
Tomato yellow leaf curl China virus (1)
Bemisia tabaci (1)
Macaca mulatta (1)
Saccharomyces cerevisiae (1)
Elaphe taeniura (1)
12461 (1)
Streptomyces (1)
Cardamine circaeoides (1)
Serratia marcescens LCT-SM213 (1)
Staphylococcus aureus subsp. aureus NCTC 8325 (1)
wastewater metagenome (1)
Macaca fascicularis fascicularis (1)
Caenorhabditis elegans (1)
Apis mellifera (1)
Drosophila melanogaster (1)
Oryctolagus cuniculus (1)

Repository

iProX (117)
pride (50)
biostudies-arrayexpress (34)
EGA (24)
MetaboLights (18)
MassIVE (10)
PeptideAtlas (3)
GNPS (2)
jPOST (2)
BioModels (1)

Tissue

Cell culture (11)
Epithelial cell (7)
Brain (4)
Others (3)
Testis (3)
Whole body (3)
Liver (3)
Kidney cell (2)
Flower (2)
Plant cell (2)
Heart (2)
Root (2)
Stem cell (2)
Photosynthetic cell (2)
Permanent cell line cell (2)
B cell (2)
Blood cell (2)
Hypophysis (1)
CARO_0000000 (1)
Umbilical cord (1)
Short term hematopoietic stem cell (1)
Ovary cell line (1)
T-cell acute lymphoblastic leukemia cell (1)
Fiber (1)
Tongue (1)
Anther (1)
Midgut (1)
Bone matrix (1)
Blood platelet (1)
Diploid cell (1)

Disease

Breast cancer (4)
Kidney cancer (3)
Disease free (2)
Multidrug-resistant tuberculosis (1)
Cognitive disorder (1)
Skin melanoma (1)
Lung cancer (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (50)
Shotgun proteomics (23)
Mass spectrometry (14)
Bottom-up proteomics (13)
Data-dependent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Mass spectrometry assay (3)
SWATH MS (3)
Data-independent acquisition (2)
Gel-based experiment (2)
Top-down proteomics (2)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
AB SOLiD System 3.0 (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
RNA mass spectrometry (1)
DiaPASEF (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (7)
Liquid Chromatography MS - positive - reverse phase (6)
MS:1000031 (3)
Q Exactive (3)
Orbitrap Fusion Lumos (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
LTQ Orbitrap Elite (2)
Illumina HiSeq 2000 (1)
LTQ FT (1)
MaXis (1)
Q Exactive mass spectrometer (Thermo Scientific) (1)
TripleTOF 5600 (1)
Orbitrap Eclipse (1)
Q Exactive HF (1)
Liquid Chromatography MS - alternating – hilic (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
QExactive (1)

Publication Date

2025 (40)
2023 (18)
2021 (16)
2022 (16)
2020 (16)
2026 (10)
2024 (10)
2012 (9)
2014 (6)
2016 (5)
2015 (5)
2013 (5)
2017 (5)
2011 (4)
2009 (4)
2018 (4)
2019 (3)
2005 (2)
2010 (2)
2008 (2)

UNIPROT ID/AC

Q6ZVE7 (3)
Q99619 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q6MZQ0 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q02833 (3)
O43194 (3)
Q9Y2C3 (3)
O00338 (3)
Q6NSJ2 (3)
Q17R98 (3)
Q9Y664 (3)
Q9UNP4 (3)
Q96BZ9 (3)
Q8WUA8 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000247315 (3)
ENSG00000147251 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:16704 (9)
CHEBI:15891 (8)
CHEBI:16919 (8)
CHEBI:28865 (8)
CHEBI:17368 (8)
CHEBI:16811 (7)
CHEBI:28044 (7)
CHEBI:17154 (7)
CHEBI:17568 (7)
CHEBI:28834 (7)
CHEBI:16359 (7)
CHEBI:16737 (7)
CHEBI:28300 (6)
CHEBI:17533 (6)
CHEBI:7916 (6)
CHEBI:17750 (6)
CHEBI:73024 (6)
CHEBI:17012 (6)
CHEBI:18211 (6)
CHEBI:24813 (6)
CHEBI:43355 (6)
CHEBI:16015 (6)
CHEBI:27897 (6)
CHEBI:15354 (6)
CHEBI:32389 (5)
CHEBI:70959 (5)
CHEBI:59783 (5)
CHEBI:16755 (5)
CHEBI:17822 (5)
CHEBI:26271 (5)

Metabolite Name

Taurine (8)
Uridine (7)
Uracil (6)
Creatine (6)
Hypoxanthine (6)
Carnosine (5)
Taurocholic acid (5)
Cholic acid (5)
Urocanic acid (5)
Creatinine (5)
Pyrrolidonecarboxylic acid (4)
L-Proline (4)
Acetylcholine (4)
Indole (4)
Deoxycholic acid (4)
L-Serine (4)
Xanthine (4)
Deoxycytidine (4)
Thymidine (4)
3-Hydroxymethylglutaric acid (3)
N-Acetyl-D-glucosamine (3)
LysoPE(18:1(9Z)/0:0) (3)
1-Methylnicotinamide (3)
Pyruvic acid (3)
Oxoglutaric acid (3)
4-Hydroxycinnamic acid (3)
Isonicotinic acid (3)
Picolinic acid (3)
Dimethylglycine (3)
L-Alanine (3)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Modification

57.021464 (1)

Study type

RNA-seq of coding RNA (12)
Transcription profiling by array (11)
RNA-seq of non coding RNA (5)
Comparative genomic hybridization by array (2)
Transcription profiling by SAGE (1)
ChIP-seq (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (570)
2022 (481)
2023 (438)
2024 (430)
2021 (361)
2020 (254)
2019 (162)
2018 (151)
2017 (117)
2016 (103)
2026 (95)
2015 (75)
2014 (62)
2013 (30)
2012 (28)
2011 (15)
2009 (11)
2010 (10)
2008 (7)
2005 (3)
2004 (3)
2007 (1)
2003 (1)
2001 (1)

Lab affiliation

State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, 510060, China (3)
Southwest University (2)
Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China (2)
Zhejiang University (2)
NHC Key Laboratory of Diagnosis and Treatment on Brain Functional Diseases, The First Affiliated Hospital of Chongqing Medical University, 1 Youyi Road, Yuzhong District, Chongqing 400016, China; (1)
Center for Tuberculosis Control of Guangdong Province, Guangzhou, 510630, China (1)
Guangxi Disease Prevention and Control Center (1)
Institute of Zoology, Chinese Academy of Sciences, China (1)
Department of Cardiology, Tianjin Union Medical Center (1)
Institute for Cancer Research, Shenzhen Bay Laboratory, Shenzhen, Guangdong, 518107, China (1)
MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China (1)
peking university (1)
2 College of Horticulture, South China Agricultural University, Guangzhou 510642, China (1)
BGI-Shenzhen,China (1)
Department of Molecular Biology; Kang Lab; Princeton University, Princeton, NJ, USA (1)
Department of Surgery, University of Michigan Medical School, Ann Arbor, MI, USA (1)
UT MD Anderson Cancer Center (1)
Institute of Interdisciplinary Medicine, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China (1)
Research Center for Blood Engineering and Manufacturing, Cyrus Tang Medical Institute, National Clinical Research Center for Hematologic Diseases, Collaborative Innovation Center of Hematology, Jiangsu Institute of Hematology, Institute of Blood and Marrow Transplantation, The First Affiliated Hospital of Soochow University, State Key Laboratory of Radiation Medicine and Protection, Soochow University, Suzhou, China. (1)
Second hospital of Shanxi Medical University (1)
Institute of Biochemistry, College of Life Sciences Zhejiang Sci-Tech University (1)
Key Laboratory of Environmental Medicine Engineering, Ministry of Education, School of Public Health, Southeast University, Nanjing, China. (1)
Institute of Pediatric Research, Children's Hospital of Soochow University, Suzhou, China. (1)
University of Michigan (1)
Department of Human Anatomy, Histology, and Embryology, Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education) and State Key Laboratory of Natural and Biomimetic Drugs,Peking University Health Science Center, Beijing 100191, China. (1)
Institute of Cotton Research, Chinese Academy of Agricultural Sciences, No.38 Huanghe Road, Anyang, Henan 455000, China (1)
Zhejiang University School of Medicine (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)
Department of Biophysics and Structural Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & School of Basic Medicine, Peking Union Medical College (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences,Guangzhou, China (1)

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Validation of the Anticolitis Efficacy of the Jian-Wei-Yu-Yang Formula.

Not available

S-EPMC9451982 | biostudies-literature

Jia-Wei-Yu-Ping-Feng-San Attenuates Group 2 Innate Lymphoid Cell-Mediated Airway Inflammation in Allergic Asthma.

Not available

S-EPMC8299004 | biostudies-literature

Wei2011_MLCactivationPathway_EndothelialPermeability

This model is from the article: An Integrated Mathematical Model of Thrombin-, Histamine-and VEGF-Mediated Signalling in Endothelial Permeability. Wei X, Han B, Zhang J, Liu X, Tan C, Jiang Y, Low B, Tidor B, Chen Y. BMC Syst Biol. 2011 Jul 15;5:112. ...

2005-01-01 | MODEL1102210000 | BioModels

A Randomized, Double-Blind, Multicenter, Placebo-Controlled Trial of Qi-Zhi-Wei-Tong Granules on Postprandial Distress Syndrome-Predominant Functional Dyspepsia.

Not available

S-EPMC6032672 | biostudies-literature

Cotton fiber LC-MS/MS - Proteomic Analysis of Differences in Fiber Development between Wild and Cultivated Gossypium hirsutum L

Upland cotton (Gossypium hirsutum L.) is one of the world’s most important fiber crops, accounting for more than 90% of all cotton production. While their wild progenitors have relatively short and coarse, often tan-colored fibers, modern cotton cultivars possess longer, finer, stronger, and whiter ...

ORGANISM(S): Gossypium hirsutum

2017-08-28 | PXD006604 | Pride